G1026152


Basic Information

Item Value
gene id G1026152
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 84464658 ~ 84465602 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1167938
taacggatgtgaaacggctagcttagttagcgtttcaatcagtgacgtcacttgctctgagaccttgaagtagtagttccccttgctctgcaagggccgtggcttttgtggagcgatgggtaacgatgcttcgagggtgactgttgatgtgtgcagaaggtccctagttcgcgcccgggtatgggcgaggggacggtctaaacttgtactgttacattgatgctgttgacccggattactggttgctgcggaaaaaggaggaaggtcaaaaggggggtgagtgtaacggatgtgaaacggctagcttagttagcgtgggcgctaaatagcgtttcaatcagtgacgtcacttgctctgagaccttgaagtagtagttccccttgctctgcaagggccgcggcttttgtggagcgatgggtaacgatgcttcgagggtgactgttgatgtgtgcagaaggtccctggttcgcgcccgggtatgggcgaggggacggtctaaaattatactgttacacatgcatttagttttacttgcatttaagagcagttggatgccacggaaggagagttgtatggcattgaagctcgtctggaggttagttaacacagtgtccaaagaagggccag
>TU1167939
taacggatgtgaaacggctagcttagttagcgtgggcgctaaatagcgtttcaatcagtgacgtcacttgctctgagaccttgaagtagtagttccccttgctctgcaagggccgcggcttttgtggagcgatgggtaacgatgcttcgagggtgactgttgatgtgtgcagagggtccctggttcgcgcccgggtatgggcgaggggacggtctaaaattatactgttacacatgcatttagttttacttgcatttaagagcagttggatgccacggaaggagagttgtatggcattgaagctcgtctggaggttagttaacacagtgtccaaagaagggccag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1167938 False 628 lncRNA 0.51 2 84464658 84465602
TU1167939 True 345 lncRNA 0.50 2 84464658 84465602

Neighbor

gene id symbol gene type direction distance location
adamts3 LOC107719190 coding downstream 38506 84235293 ~ 84426152 (-)
grsf1 grsf1 coding downstream 380458 84045512 ~ 84084200 (-)
LOC110535142 mapk1 coding downstream 482018 83922608 ~ 83982640 (-)
LOC110536511 NA coding downstream 545029 83914813 ~ 83921303 (-)
ypel1 ypel1 coding downstream 562294 83873900 ~ 83903039 (-)
smarca2 NA coding upstream 36283 84501885 ~ 84719806 (-)
dmrt2a LOC106570979 coding upstream 495689 84961291 ~ 84965767 (-)
LOC118937429 dmrt3 coding upstream 580512 85046114 ~ 85122372 (-)
kank1a kank1 coding upstream 774007 85239609 ~ 85392002 (-)
dapk1 dapk1 coding upstream 986583 85452185 ~ 85658741 (-)
G1026111 NA non-coding downstream 42958 84420577 ~ 84421700 (-)
G1026091 NA non-coding downstream 85755 84372978 ~ 84378903 (-)
G1026031 NA non-coding downstream 229420 84226393 ~ 84235238 (-)
G1026027 NA non-coding downstream 237081 84220826 ~ 84227577 (-)
G1025752 NA non-coding downstream 269164 84184860 ~ 84195494 (-)
G1026164 NA non-coding upstream 51475 84517077 ~ 84520777 (-)
G1026165 NA non-coding upstream 58793 84524395 ~ 84534134 (-)
G1026167 NA non-coding upstream 70670 84536272 ~ 84539653 (-)
G1026169 NA non-coding upstream 71643 84537245 ~ 84540416 (-)
G1026185 NA non-coding upstream 126048 84591650 ~ 84616480 (-)
G1025498 NA other downstream 746050 83683265 ~ 83718776 (-)
G1025467 NA other downstream 837868 83544297 ~ 83626790 (-)
G1025481 NA other downstream 899084 83562302 ~ 83565574 (-)
LOC110536484 LOC106570928 other downstream 2205693 82257489 ~ 82522382 (-)
G1026586 NA other upstream 721724 85187326 ~ 85197500 (-)
G1026978 NA other upstream 1147750 85613352 ~ 85614375 (-)

Expression


Co-expression Network