G1026793



Basic Information


Item Value
gene id G1026793
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 85409046 ~ 85409305 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1168721
tcctccaccaaactttacagttggcactatgcattggggcatgtagcgttctcctggcatccaccaaacccaggtttgtccgttggactgccagatggagaAGAGtgagtcatcaaatcaaatcaaatcaaattttatttgtcacatacacatggttagcagatgttaatgcgagtgtagcgaaatgcttgtgcttctagttccgacaatgcagtaataaccaacaagtaatctagctaacaattccaaaactactacct

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1168721 True 260 lncRNA 0.42 1 85409046 85409305

Neighbor


gene id symbol gene type direction distance location
kank1a kank1 coding downstream 17044 85239609 ~ 85392002 (-)
LOC118937429 dmrt3 coding downstream 286674 85046114 ~ 85122372 (-)
dmrt2a LOC106570979 coding downstream 443279 84961291 ~ 84965767 (-)
smarca2 NA coding downstream 689240 84501885 ~ 84719806 (-)
adamts3 LOC107719190 coding downstream 982894 84235293 ~ 84426152 (-)
dapk1 dapk1 coding upstream 42880 85452185 ~ 85658741 (-)
LOC118937430 NA coding upstream 111274 85520579 ~ 85522516 (-)
tmem8b tmem8b coding upstream 632437 86041742 ~ 86232638 (-)
G1026789 NA non-coding downstream 3230 85405599 ~ 85405816 (-)
G1026787 NA non-coding downstream 6041 85402774 ~ 85403005 (-)
G1026772 NA non-coding downstream 66518 85342257 ~ 85342528 (-)
G1026771 NA non-coding downstream 66996 85341067 ~ 85342050 (-)
G1026769 NA non-coding downstream 70812 85337949 ~ 85338234 (-)
G1026794 NA non-coding upstream 652 85409957 ~ 85429505 (-)
G1026935 NA non-coding upstream 26706 85436011 ~ 85436478 (-)
G1026937 NA non-coding upstream 35590 85444895 ~ 85445283 (-)
G1026931 NA non-coding upstream 38477 85447782 ~ 85451386 (-)
G1026938 NA non-coding upstream 44454 85453759 ~ 85455836 (-)
G1026586 NA other downstream 211546 85187326 ~ 85197500 (-)
ypel1 ypel1 other downstream 1506007 83873900 ~ 83903039 (-)
G1025498 NA other downstream 1690438 83683265 ~ 83718776 (-)
G1025467 NA other downstream 1782256 83544297 ~ 83626790 (-)
G1025481 NA other downstream 1843472 83562302 ~ 83565574 (-)
G1026978 NA other upstream 204047 85613352 ~ 85614375 (-)

Expression



Co-expression Network