Gene
RNA
| Item | Value |
|---|---|
| gene id | G1026935 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 85436011 ~ 85436478 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: leucine-rich repeat extensin-like protein 5 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1168916 | True | 468 | lncRNA | 0.29 | 1 | 85436011 | 85436478 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| kank1a | kank1 | coding | downstream | 44009 | 85239609 ~ 85392002 (-) |
| LOC118937429 | dmrt3 | coding | downstream | 313639 | 85046114 ~ 85122372 (-) |
| dmrt2a | LOC106570979 | coding | downstream | 470244 | 84961291 ~ 84965767 (-) |
| smarca2 | NA | coding | downstream | 716205 | 84501885 ~ 84719806 (-) |
| adamts3 | LOC107719190 | coding | downstream | 1009859 | 84235293 ~ 84426152 (-) |
| dapk1 | dapk1 | coding | upstream | 15707 | 85452185 ~ 85658741 (-) |
| LOC118937430 | NA | coding | upstream | 84101 | 85520579 ~ 85522516 (-) |
| tmem8b | tmem8b | coding | upstream | 605264 | 86041742 ~ 86232638 (-) |
| G1026794 | NA | non-coding | downstream | 6506 | 85409957 ~ 85429505 (-) |
| G1026793 | NA | non-coding | downstream | 26706 | 85409046 ~ 85409305 (-) |
| G1026789 | NA | non-coding | downstream | 30195 | 85405599 ~ 85405816 (-) |
| G1026787 | NA | non-coding | downstream | 33006 | 85402774 ~ 85403005 (-) |
| G1026772 | NA | non-coding | downstream | 93483 | 85342257 ~ 85342528 (-) |
| G1026937 | NA | non-coding | upstream | 8417 | 85444895 ~ 85445283 (-) |
| G1026931 | NA | non-coding | upstream | 11304 | 85447782 ~ 85451386 (-) |
| G1026938 | NA | non-coding | upstream | 17281 | 85453759 ~ 85455836 (-) |
| G1026948 | NA | non-coding | upstream | 92673 | 85529151 ~ 85532743 (-) |
| G1026969 | NA | non-coding | upstream | 153471 | 85589949 ~ 85596851 (-) |
| G1026586 | NA | other | downstream | 238511 | 85187326 ~ 85197500 (-) |
| ypel1 | ypel1 | other | downstream | 1532972 | 83873900 ~ 83903039 (-) |
| G1025498 | NA | other | downstream | 1717403 | 83683265 ~ 83718776 (-) |
| G1025467 | NA | other | downstream | 1809221 | 83544297 ~ 83626790 (-) |
| G1025481 | NA | other | downstream | 1870437 | 83562302 ~ 83565574 (-) |
| G1026978 | NA | other | upstream | 176874 | 85613352 ~ 85614375 (-) |
