G1026938


Basic Information

Item Value
gene id G1026938
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 85453759 ~ 85455836 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1168919
caagactgtctgaatgactccccagtccctatcaagactgtctgaacgactccccagtccctaccaatactgtctgaatgactccccagtccctatcaatactgtctgaatgactccccagtccctaccaagactgtctgaatgactccccagtccctaccaagactgtctgaatgactccccagtccctaccaagactgtctgaatgactccccagtccctgtcaagactgtctgaatgactccccagtccctaccaatactgtctgaatgactccccagtcccta
>TU1168920
ctaccaagactgtctgaatgactccccagtccctatcaagactgtctgaatgactccccagtccctaccaagactgtctgaatgactccccagtccctgtcaagactgtctgaaagactccccagtccctgtcaagactgtctgaatgactccccagtccctatcaagactgtctgaatgactccccagtccctaccatgactgtctgaatgactccccagtccctaccaagactgtctgaatgactccccagtccctatcaagactgtctgaatgactccccagtccctaccaagactgtctgaatgactccccagtccctaccaagactgtctgaatgactccccagtccctgtcaagactgtctgaatgactccccagtccctgtcaagactgtctgaatgactccccagtccctatcaagactgtctgaatgactccccagtccctaccaagactgtctgaatgactccccagtccctaccaagactgtctgaatgactccccagtccctaccAAGACTGTCTaaatgactccccagtccctgtcaatactgtctgaatgactccccagtccctaccaagactgtctgaatgactccccagtccctaccaagactgtctgaatgactccccagtccctaccaagactgtctgaatgactccccagtccctgtcaagactgtctgaatgactccccagtccctaccaatactgtctgaatgactccccagtcccta

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1168919 False 287 lncRNA 0.52 2 85453759 85455836
TU1168920 True 739 lncRNA 0.52 2 85453759 85454593

Neighbor

gene id symbol gene type direction distance location
kank1a kank1 coding downstream 61757 85239609 ~ 85392002 (-)
LOC118937429 dmrt3 coding downstream 331387 85046114 ~ 85122372 (-)
dmrt2a LOC106570979 coding downstream 487992 84961291 ~ 84965767 (-)
smarca2 NA coding downstream 733953 84501885 ~ 84719806 (-)
adamts3 LOC107719190 coding downstream 1027607 84235293 ~ 84426152 (-)
LOC118937430 NA coding upstream 64743 85520579 ~ 85522516 (-)
tmem8b tmem8b coding upstream 585906 86041742 ~ 86232638 (-)
G1026931 NA non-coding downstream 2373 85447782 ~ 85451386 (-)
G1026937 NA non-coding downstream 8476 85444895 ~ 85445283 (-)
G1026935 NA non-coding downstream 17281 85436011 ~ 85436478 (-)
G1026794 NA non-coding downstream 24254 85409957 ~ 85429505 (-)
G1026793 NA non-coding downstream 44454 85409046 ~ 85409305 (-)
G1026948 NA non-coding upstream 73315 85529151 ~ 85532743 (-)
G1026969 NA non-coding upstream 134113 85589949 ~ 85596851 (-)
G1026970 NA non-coding upstream 136648 85592484 ~ 85593856 (-)
G1026973 NA non-coding upstream 142525 85598361 ~ 85602478 (-)
G1026983 NA non-coding upstream 183521 85639357 ~ 85644380 (-)
G1026586 NA other downstream 256259 85187326 ~ 85197500 (-)
ypel1 ypel1 other downstream 1550720 83873900 ~ 83903039 (-)
G1025498 NA other downstream 1735151 83683265 ~ 83718776 (-)
G1025467 NA other downstream 1826969 83544297 ~ 83626790 (-)
G1025481 NA other downstream 1888185 83562302 ~ 83565574 (-)
G1026978 NA other upstream 157516 85613352 ~ 85614375 (-)

Expression


Co-expression Network