G1026969



Basic Information


Item Value
gene id G1026969
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 85589949 ~ 85596851 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1168956
ggccctagtttctaccttcttaacagcactatcaacaaggcaggtcctacaggccctagtttctaccttcttaacaacactatcaacaaggcaggtcctacaggccctagtttctaagagtagctgctgccttggcaggaactaatggggatccataataaaccccaggaagagtagctgctgccttggcaggaactaatgggaatccataataaaccccagggagagtagctgctgccttggcaggaactaatggggatccataataaaccccaggaagagtagctgctgccttgacaggaactaatggggatccataataaaccccaggaagagtagctcctgcc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1168956 True 347 lncRNA 0.49 2 85589949 85596851

Neighbor


gene id symbol gene type direction distance location
LOC118937430 NA coding downstream 67433 85520579 ~ 85522516 (-)
kank1a kank1 coding downstream 197947 85239609 ~ 85392002 (-)
LOC118937429 dmrt3 coding downstream 467577 85046114 ~ 85122372 (-)
dmrt2a LOC106570979 coding downstream 624182 84961291 ~ 84965767 (-)
smarca2 NA coding downstream 870143 84501885 ~ 84719806 (-)
tmem8b tmem8b coding upstream 444891 86041742 ~ 86232638 (-)
G1026948 NA non-coding downstream 57206 85529151 ~ 85532743 (-)
G1026938 NA non-coding downstream 134113 85453759 ~ 85455836 (-)
G1026931 NA non-coding downstream 138563 85447782 ~ 85451386 (-)
G1026937 NA non-coding downstream 144666 85444895 ~ 85445283 (-)
G1026935 NA non-coding downstream 153471 85436011 ~ 85436478 (-)
G1026973 NA non-coding upstream 1510 85598361 ~ 85602478 (-)
G1026983 NA non-coding upstream 42506 85639357 ~ 85644380 (-)
G1027010 NA non-coding upstream 116302 85713153 ~ 85713505 (-)
G1027037 NA non-coding upstream 149008 85745859 ~ 85746162 (-)
G1027054 NA non-coding upstream 157565 85754416 ~ 85754880 (-)
G1026586 NA other downstream 392449 85187326 ~ 85197500 (-)
ypel1 ypel1 other downstream 1686910 83873900 ~ 83903039 (-)
G1025498 NA other downstream 1871341 83683265 ~ 83718776 (-)
G1025467 NA other downstream 1963159 83544297 ~ 83626790 (-)
G1025481 NA other downstream 2024375 83562302 ~ 83565574 (-)
G1026978 NA other upstream 16501 85613352 ~ 85614375 (-)

Expression



Co-expression Network