G1027010



Basic Information


Item Value
gene id G1027010
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 85713153 ~ 85713505 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1169019
cgcagccggacaactttctcacggtttctggaaggaaatgctgtaggaacgctcaaccggtgtcgctcattcagccgacagaaactttcaaccggttttccccattaagcagcgagtcggagtcagaggccgagtcttctctggtctctactcctcccgttacggggtctgagacgccgaagcttcccaccattagctctgacaaattgaaaactctagtcattggcgactccattacccgcagtattagacttaaaacgagtcatccagcgatcatacactgtttaccaggtggcagggctaccgacgttaaggctaatctgaagatggtgctggctaaagctaaaactggc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1169019 True 353 lncRNA 0.51 1 85713153 85713505

Neighbor


gene id symbol gene type direction distance location
dapk1 dapk1 coding downstream 54412 85452185 ~ 85658741 (-)
LOC118937430 NA coding downstream 190637 85520579 ~ 85522516 (-)
kank1a kank1 coding downstream 321151 85239609 ~ 85392002 (-)
LOC118937429 dmrt3 coding downstream 590781 85046114 ~ 85122372 (-)
dmrt2a LOC106570979 coding downstream 747386 84961291 ~ 84965767 (-)
tmem8b tmem8b coding upstream 328237 86041742 ~ 86232638 (-)
G1026983 NA non-coding downstream 68773 85639357 ~ 85644380 (-)
G1026973 NA non-coding downstream 110675 85598361 ~ 85602478 (-)
G1026969 NA non-coding downstream 116302 85589949 ~ 85596851 (-)
G1026970 NA non-coding downstream 119297 85592484 ~ 85593856 (-)
G1026948 NA non-coding downstream 180410 85529151 ~ 85532743 (-)
G1027037 NA non-coding upstream 32354 85745859 ~ 85746162 (-)
G1027054 NA non-coding upstream 40911 85754416 ~ 85754880 (-)
G1027083 NA non-coding upstream 120704 85834209 ~ 85834434 (-)
G1027084 NA non-coding upstream 122485 85835990 ~ 85836201 (-)
G1027110 NA non-coding upstream 148057 85861562 ~ 85861783 (-)
G1026978 NA other downstream 98778 85613352 ~ 85614375 (-)
G1026586 NA other downstream 515653 85187326 ~ 85197500 (-)
ypel1 ypel1 other downstream 1810114 83873900 ~ 83903039 (-)
G1025498 NA other downstream 1994545 83683265 ~ 83718776 (-)
G1025467 NA other downstream 2086363 83544297 ~ 83626790 (-)

Expression



Co-expression Network