G1027434



Basic Information


Item Value
gene id G1027434
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 86184507 ~ 86186385 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1169546
GTGTAGATAAATTCGACAAATCTAAAATACCATTATGGGTCTTTGTAATCTGttggaaatatgtgtctctaatatggtcatacatttggcaggaagtgcagctcagtttccacctcattttgtgggcagtgtgcacatagcctgtcttctcttgagagccaggtctgcctacggcagcctttctcaatagcaaggttatgttcactgagtctgtacatagtcaaggattttcttcattttgggtcagtcacggtTT

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1169546 True 256 lncRNA 0.42 2 86184507 86186385

Neighbor


gene id symbol gene type direction distance location
dapk1 dapk1 coding downstream 525766 85452185 ~ 85658741 (-)
LOC118937430 NA coding downstream 661991 85520579 ~ 85522516 (-)
kank1a kank1 coding downstream 792505 85239609 ~ 85392002 (-)
LOC118937429 dmrt3 coding downstream 1062135 85046114 ~ 85122372 (-)
dmrt2a LOC106570979 coding downstream 1218740 84961291 ~ 84965767 (-)
G1027332 NA non-coding downstream 114412 86018596 ~ 86070095 (-)
tmem8b tmem8b non-coding downstream 141062 86041742 ~ 86232638 (-)
G1027220 NA non-coding downstream 166244 86017968 ~ 86018263 (-)
G1027218 NA non-coding downstream 166913 86017215 ~ 86017594 (-)
G1027214 NA non-coding downstream 175236 86009034 ~ 86009271 (-)
G1027439 NA non-coding upstream 10481 86196866 ~ 86199070 (-)
G1027445 NA non-coding upstream 26231 86212616 ~ 86213229 (-)
G1027446 NA non-coding upstream 44297 86230682 ~ 86230985 (-)
G1027448 NA non-coding upstream 47627 86234012 ~ 86234353 (-)
G1027451 NA non-coding upstream 51381 86237766 ~ 86237965 (-)
G1026978 NA other downstream 570132 85613352 ~ 85614375 (-)
G1026586 NA other downstream 987007 85187326 ~ 85197500 (-)
ypel1 ypel1 other downstream 2281468 83873900 ~ 83903039 (-)
G1025498 NA other downstream 2465899 83683265 ~ 83718776 (-)
G1025467 NA other downstream 2557717 83544297 ~ 83626790 (-)

Expression



Co-expression Network