XLOC_002912 (BX465844.1)


Basic Information

Item Value
gene id XLOC_002912
gene name BX465844.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 35160010 ~ 35164291 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005392
TGAGTTCAAGACACTTTAGGTGTTGGCGTTGACCAGAATAGCTTCAAGCTTGGATTAGCCGGTTGCTCATTTGAGGTCTCCATGTTCTCCTGTTCTTCATCAGATGGATTTGATTGAGGGCGTCTCTCCAGCATGGCCACGAAGAACCCATGAGTGCGGGTTTTTGCTGTGCTCGCGCGAAGACACTGGGTCAAAGGCTCATGACCCCTCTCAGGCCAGTCTGGAAGAAGATGCACTAATCtacaaatacaacaaaaacacTCTTAAATATTACTGTTAATTTTCCTTTACAGACTGATCGTTTTGCTATATAAGACTTCAATGTATCTTCAAGAGCCACAAATATTAAGTTTGTTCTGCCTGAATAAGGTGTTTCTTGACTCAAAGCTCCAGCTAtcgttgacttgcattttatgaatcaccaatgcTCAGATTCAGCTAGAAATCTTCTTTAATGATCTACTGAAGAaagaaaaagtcacctacatcttggacagcctgaggGGTTCCGCTGTAAGCAGGCCGTCACAACCTCCTCGTTCTCCTGCGAGTGGATGGAGCAGGTTGAATAGACGATCCGCTCCAGCTGAGGAAACTGCAGAGCATGATTCAGACAGTGAAGCTGAAACGCAGCCAGAGCCTGCAGACGACCGTCCTCCTGTGTCTCGGGGAGCTCGTCCCGCAGACAAACCATCCCTGAAACAAACAAGCACAATGTCTGAATGTAAAGTCAAGGCTTCTGTTGGCATCAAATCTTCTTGTTGTGATGAAATGCTAAAGCTTTTATCATGGTATAtgatattattatgatattgacctaagctgcaaaaaatattgttttaactggtataattcatttaatttgtcaattcatctttatttctataatgcTTTTTACAAGGCAGCTTAACATACAGTGCTCAatataattgagtacaccccattttgaaaatgaatatttttatccatttctcagtgaatataggtcattttttggtgcatttgaacaaaaaatttattaaacGCACATATTTATGAACTAGAAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000094647

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005392 True 1046 lncRNA 0.40 4 35160010 35164291

Neighbor

gene id symbol gene type direction distance location
XLOC_002911 ripk4 coding downstream 6622 35114153 ~ 35153388 (-)
XLOC_002910 C10H21orf91 coding downstream 51327 35059856 ~ 35108683 (-)
XLOC_002909 NA coding downstream 101566 35054281 ~ 35058444 (-)
XLOC_002908 supt20 coding downstream 107812 35012094 ~ 35052198 (-)
XLOC_002907 smad9 coding downstream 157279 34960751 ~ 35002731 (-)
XLOC_002913 pom121 coding upstream 5353 35169644 ~ 35186310 (-)
XLOC_002914 ypel2a coding upstream 37559 35201850 ~ 35236949 (-)
XLOC_002915 smg8 coding upstream 74197 35238488 ~ 35248502 (-)
XLOC_002916 prr11 coding upstream 85914 35250205 ~ 35257561 (-)
XLOC_002917 NA coding upstream 148601 35312892 ~ 35321637 (-)
XLOC_002906 CT573139.2 non-coding downstream 200832 34951060 ~ 34959178 (-)
XLOC_002902 BX510654.1 non-coding downstream 832616 34327262 ~ 34327394 (-)
XLOC_002900 NA non-coding downstream 961444 34196782 ~ 34198566 (-)
XLOC_002891 BX569785.1 non-coding downstream 1279646 33876131 ~ 33880364 (-)
XLOC_002919 NA non-coding upstream 265213 35429504 ~ 35431655 (-)
XLOC_002922 BX663516.3 non-coding upstream 456042 35620333 ~ 35620449 (-)
XLOC_002923 NA non-coding upstream 486293 35650584 ~ 35654680 (-)
XLOC_002925 NA non-coding upstream 647461 35811752 ~ 36093533 (-)

Expression


Co-expression Network