trabd2a (trabd2a)


Basic Information

Item Value
gene id trabd2a
gene name trabd2a
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 6026192 ~ 6155862 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036936776.1
CATAGAGATGCTTACACACTCCAGCAACACTGTGAGAGAAATGAGGGGAGTCTGGAGTTATGGAAACAAGGAGGACACGATAGAGAACGTTTCTTCGAGGATTTGGGAACGGTTGATGGCGCTTGGAATTGGACAGCCAATTCAGGAGAAAGTGTTGCTACGTTCGAATTCCGAACAGCACCGGTGAAATCATTTCTTTCTGCGGGCCTGTGTTTGGAAGTAGATAACAGCGGAGTAGTAACAACATCGCGGCGAGGAATTCCACCGCTCATTCCGGGAACCTGGGGACGCACGAAGTTTAGTTTAGAACCTGTTGCTTGCGTGCACTTTGGATACTAATTTACTGACTGTGCACAATCTGCTCGGTTCTAAGTGTGGCCTATCAAAGACTGGAAAGTTAGATTTGATTTCATCTCATTGAGGATTGTAGCCTAGCCTACTATCGCGGAGCAAGTTGTAAGCTTCCATCAAGGGCCATGCATGGCACCTTATTATCAAATATGAGGGAGAGGGAAAGTGTCAGATTCAAGACAACAGCATGAAGACATAGACACAAAATAACGTCAATGCTTTCACACAAGTGGGAAAAAAACATCACTCAAAGTATTGAATGCAATTTTACTCAAACATGAGTTCTTCCTGCGGCAGAAAGGTAGATAGGCTATATGTCGGCGTGTTTGATTTATTATTTCAATGGAACTGAAATTCGGAAAATAATTGAAAGTAATTTTCCCCAGGAAAGAATTGTTGTTGGGTAAGCTTCATCTTGCGACACGTTGTAAAAATAGCGTGCACGTTGGGAGTTACGATGCTGGTCTCTTGGGTCACATTTATTCAAGCGTTCCTAATACTGCTGGTGAAAGGAGCCGACCAATGGAGCCTCCGGGAGTCCTCTAACTGCGAGCTAAAAAGGAAACAAAGTGATCTGAACTCTTTCCTGTGGACCATCAAACGTAACCCTCCGTCCTACTTCTACGGCACGATCCACGTCCCTTACACGCGCGTCTGGGACTTTATCCCAGAGAACTCCAAGAAGGCTTTCCAGGAGAGTAACATGGTTTACTTGGAGCTGGACCTGACTGACCCCTACACCATCTCAGCCCTGACCAGCTGCCAGCTCCTCCCCCAGGGGGGAACCCTACAGGACGTTCTACCCAGAGACATCTACGGACGCCTCAAGAGGCACTTGGAGTACGTCAAGCTCATGATGCCGTTCTGGATGACTCCTGACCAGAGGGGTAAAGGCCTCTACGCTGACTACCTGTTTAATGCGATAGCGGGGAACTGGGAGAGGAAGAGGCCTGTGTGGGTGATGTTGATGGTGAACTCGTTGACGGAGGCGGACATTAAGACGAGGGGGGTCCCGGTGTTGGATCTGTACCTGGCCCAGGAGGcagagaggatgaggaagagaacaGGAGCTGTGGAGAAGGTGGAGGAGCAGTGTCACCCGCTCAACGGTCTCAACTTCTCTCAGGTGATCTTTGCCCTGAACCAGACCCTTGTACAGCAGGAGAGTGTGAGAGCAGGCAGTCTGCAGGGCTCCTATACCACTGAGGACCTCATCAAGCACTACAACTGTGGAGACCTCAACTCCATCATCTTTAACCACGAcacctctcagGTCCCCAACTTCAACAACGTGACCCTGCGCCCCAGCGAGCAGATAACGGCCCAGGAGATAGACAGCTACTTCAGACAGGAACTGATCTACAAGAGGAACGACAGGATGGGGAACAGGGTTAAGACTCTGATGGAAGAACACCCTGACAACAGCTTCTTCTTCGCCTTCGGAGCAgGTCACTTCCTGGGCAACAACACAGTGATTGATGTGCTGAGGAGTCAGGGCTATGAAGTGGAGCACACTCCTGCAGGGCAACCCATTAACAGTCGATCGATATCGGCCCCCGACCAGACGGGTCATTCTCTGGGTCAGAACCTGGATGAGTCCCCTTACCTGGAGCCGTTCCTCCACGAGCTTCATGATGAGGAGCAACAGCACCCTCTGCAGGACAACCCACTACCCAACATACCTCGTCACTCCCCCAGCTTGGAGCTGATGGACAAGATGGACCGCAAGCTGAAGAAGAAACGACGTAACAAACAGAGGAAACATCAGAGAAACGGACAGTTTAATGACCTCTGGGTCCGCATCGAGGAGAGCACCACAGTCGAGTCCCCTCCTCCTCCGCTGGTCCGTCTTATTAATGGTTACATCACCGTACGGCCTCACCACCACGACCACGAGAGAGGCCACGCCCACGCCAGAGCCAATTACAACAGGTTGTTTTCAGGCTCCTCCGCCTCTACGCCCTTGTGTGTCTTCTGGTTACTTTTTACAGTGTTGGGTCATATCTGGACTCTCTAGTAGCAGGTCTGTACAGTAGGTTACTGGTTCAAAACCCTCCTGCTAATATCTGGACTCTCTAATAGCAGGTCTGTACAGGAGGTTACTGGTTCAAAACCCTCCTGCTAATATCTGGACTCTCTAGTAGCAGGTCTGTACAGGAGGTTGTTGGTTTAAAATCCTCCTGCTAACATCTGGACTCTAGTAGCAGCTCTAGTCTAAAGCACGAGGTTATTGGTTCAAATCCCTCCTGCTCACAATGAATCATCTATTTCAACACACATTGGGGGCGAATCCAAACTTTCCCTTACGTCAAATTTTCAGttaatcatgcattgatgtcGAGTGACAATGTGACTTAAAggaatacttcaggattttggcaattaaGCCATTTATGTACTTTCCCAGAGTCAGATAAACTCATGGATAcaatttgtatgtctctgcatcTGGTATGAAGAAATGTACaggtagtttcgcgagccaatgctaactagcgttagcgcaatgactggaagtctatgttATCTACTAGCGTGAAATTGCGCTGACGCTAATTAGCGACTTCCTTCAAACTTCCCTCAGGGGCATGAAAATGGtgtccacaagttcatctgactctggagaagtagaaaaagggcttcattgccaaaatcctgcaGCATCCCTTTAATGGAAGTTAGGATTTGTCCAAATCCATCTCGACTGGATCTTTTCCGTGTATattatttcaaatgttttttgtttgtttttgttttacagCAGCAAATGTATTATAAATAACCCAAACGGCTCTTAGTCTGACAAGATTGTTTTCTTCCAACTcccttaattaattaatttattctTCACTTTTTGAAGAATGCGTTTTGTATCGCATAATACTGTGGGAATTGTACATATCTACATATTATAGATTGTATTTTTAGAAATATGACATTTTGAATggttgaatgtgttttgtttattgttgttgtttataaatagatacagtatattttcTAGACTAAAGCTGGTACTAACCACCATAACCCGTATTTGACAGCCTGGTTCccgatctgtttgtgctgtcttggcATTGACCATCGGGCAGGGGTATTGAAATCCGAGCCTGGAGGTCCATAATACTGCTGGTTTTATGTTCCACCTGAAAATTGATTTCATCCACCTGGTGCCCCAGGTCTAAATCGGTCCTTGATTTAGAGGCAAtcagcagtggaactggcttcaaggtcaatgttttgaattggctatgttataggagttggcaagacagcacaaatatACCTGGAACCAGGCTACATATCTCCTCTAGGTTGTAATGTGACGTCTGAGAGAAACGATCCAAACCAGTATTATCTACGTCTTGTTGTCTGGGAGAAACGATCCAAACCAATGTTATCTACGGCTTGTTGTCTGGGAGAAACGATCCAAACCAGTGTTATCTACGGCTGGTTGTCTGAGAGAAACGATCCAAACCAGTGTTATCTACGGCTTGTTGTCTGGGAGAAACGATCCAAACCAGTGTTATCTACGGCTTGTTGTCTGGGAGAAACTATCCAAACCAGTGTTATCTACGGCTTGTTGTCTGGGAGAAACGATCCAAACCAGTGTTATCTACGGCTTGTTGTCTGGGAGAAACGATCCAAACCAGTGTTATCTACGGCTTGTTGTCTGAGAGAAACGATCCAAACCAGTGTTATCTACGGCTTGTTGTCTGGGAGAAACGATCCAAACCAGTGTTATCTACGGCTTGTTGTCTGGGAGAAACGATCCAAACCAGTGTTATCTACGGCTTGTAGTCGGAGAGAAACGATCCAAACCAGTGTTATCTACGGCTTGTAGTCGGAGAGAAACGATCCAAACCAGTGTTATCTACGGCTTGTTGTCTGAGAGAAACGATCCAAACCAGTGTTATCTACGGCTTGTTGTCTGGGAGAAACGATCCAAACCAGTGTTATCTACGGCTTGTAGTCGGAGAGAAACGATCCAAACCAGTGTTATCTACGGCTTGTAGTCGGAGAGACACGATCCAAACCAGTGTTATCTACGGCTTGTAGTCGGAGAGACACGATCCAAACCAGTGTTATCTACGGCTTGTTGTCTGGGAGAAACGATCCAAACCAGTGTTATCTACGGCTTGTTGTCTGTGAGAAAC
>XM_036936777.1
ACATAGAGATGCTTACACACTCCAGCAACACTGTGAGAGAAATGAGGGGAGTCTGGAGTTATGGAAACAAGGAGGACACGATAGAGAACGTTTCTTCGAGGATTTGGGAACGGTTGATGGCGCTTGGAATTGGACAGCCAATTCAGGAGAAAGTGTTGCTACGTTCGAATTCCGAACAGCACCGGTGAAATCATTTCTTTCTGCGGGCCTGTGTTTGGAAGTAGATAACAGCGGAGTAGTAACAACATCGCGGCGAGGAATTCCACCGCTCATTCCGGGAACCTGGGGACGCACGAAGTTTAGTTTAGAACCTGTTGCTTGCGTGCACTTTGGATACTAATTTACTGACTGTGCACAATCTGCTCGGTTCTAAGTGTGGCCTATCAAAGACTGGAAAGTTAGATTTGATTTCATCTCATTGAGGATTGTAGCCTAGCCTACTATCGCGGAGCAAGTTGTAAGCTTCCATCAAGGGCCATGCATGGCACCTTATTATCAAATATGAGGGAGAGGGAAAGTGTCAGATTCAAGACAACAGCATGAAGACATAGACACAAAATAACGTCAATGCTTTCACACAAGTGGGAAAAAAACATCACTCAAAGTATTGAATGCAATTTTACTCAAACATGAGTTCTTCCTGCGGCAGAAAGGTAGATAGGCTATATGTCGGCGTGTTTGATTTATTATTTCAATGGAACTGAAATTCGGAAAATAATTGAAAGTAATTTTCCCCAGGAAAGAATTGTTGTTGGGTAAGCTTCATCTTGCGACACGTTGTAAAAATAGCGTGCACGTTGGGAGTTACGATGCTGGTCTCTTGGGTCACATTTATTCAAGCGTTCCTAATACTGCTGGTGAAAGGAGCCGACCAATGGAGCCTCCGGGAGTCCTCTAACTGCGAGCTAAAAAGGAAACAAAGTGATCTGAACTCTTTCCTGTGGACCATCAAACGTAACCCTCCGTCCTACTTCTACGGCACGATCCACGTCCCTTACACGCGCGTCTGGGACTTTATCCCAGAGAACTCCAAGAAGGCTTTCCAGGAGAGTAACATGGTTTACTTGGAGCTGGACCTGACTGACCCCTACACCATCTCAGCCCTGACCAGCTGCCAGCTCCTCCCCCAGGGGGGAACCCTACAGGACGTTCTACCCAGAGACATCTACGGACGCCTCAAGAGGCACTTGGAGTACGTCAAGCTCATGATGCCGTTCTGGATGACTCCTGACCAGAGGGGTAAAGGCCTCTACGCTGACTACCTGTTTAATGCGATAGCGGGGAACTGGGAGAGGAAGAGGCCTGTGTGGGTGATGTTGATGGTGAACTCGTTGACGGAGGCGGACATTAAGACGAGGGGGGTCCCGGTGTTGGATCTGTACCTGGCCCAGGAGGcagagaggatgaggaagagaacaGGAGCTGTGGAGAAGGTGGAGGAGCAGTGTCACCCGCTCAACGGTCTCAACTTCTCTCAGGTGATCTTTGCCCTGAACCAGACCCTTGTACAGCAGGAGAGTGTGAGAGCAGGCAGTCTGCAGGGCTCCTATACCACTGAGGACCTCATCAAGCACTACAACTGTGGAGACCTCAACTCCATCATCTTTAACCACGAcacctctcagGTCCCCAACTTCAACAACGTGACCCTGCGCCCCAGCGAGCAGATAACGGCCCAGGAGATAGACAGCTACTTCAGACAGGAACTGATCTACAAGAGGAACGACAGGATGGGGAACAGGGTTAAGACTCTGATGGAAGAACACCCTGACAACAGCTTCTTCTTCGCCTTCGGAGCAgGTCACTTCCTGGGCAACAACACAGTGATTGATGTGCTGAGGAGTCAGGGCTATGAAGTGGAGCACACTCCTGCAGGGCAACCCATTAACAGTCGATCGATATCGGCCCCCGACCAGACGGGTCATTCTCTGGGTCAGAACCTGGATGAGTCCCCTTACCTGGAGCCGTTCCTCCACGAGCTTCATGATGAGGAGCAACAGCACCCTCTGCAGGACAACCCACTACCCAACATACCTCGTCACTCCCCCAGCTTGGAGCTGATGGACAAGATGGACCGCAAGCTGAAGAAGAAACGACGTAACAAACAGAGGAAACATCAGAGAAACGGACAGTTTAATGACCTCTGGGTCCGCATCGAGGAGAGCACCACAGTCGAGTCCCCTCCTCCTCCGCTGGTCCGTCTTATTAATGGTTACATCACCGTACGGCCTCACCACCACGACCACGAGAGAGGCCACGCCCACGCCAGAGCCAATTACAACAGGTTGTTTTCAGGCTCCTCCGCCTCTACGCCCTTGTGTGTCTTCTGGTTACTTTTTACAGTGTTGGGTCATATCTGGACTCTCTAGTAGCAGGTCTGTACAGGAGGTTACTGGTTCAAAACCCTCCTGCTAATATCTGGACTCTCTAGTAGCAGGTCTGTACAGGAGGTTGTTGGTTTAAAATCCTCCTGCTAACATCTGGACTCTAGTAGCAGCTCTAGTCTAAAGCACGAGGTTATTGGTTCAAATCCCTCCTGCTCACAATGAATCATCTATTTCAACACACATTGGGGGCGAATCCAAACTTTCCCTTACGTCAAATTTTCAGttaatcatgcattgatgtcGAGTGACAATGTGACTTAAAggaatacttcaggattttggcaattaaGCCATTTATGTACTTTCCCAGAGTCAGATAAACTCATGGATAcaatttgtatgtctctgcatcTGGTATGAAGAAATGTACaggtagtttcgcgagccaatgctaactagcgttagcgcaatgactggaagtctatgttATCTACTAGCGTGAAATTGCGCTGACGCTAATTAGCGACTTCCTTCAAACTTCCCTCAGGGGCATGAAAATGGtgtccacaagttcatctgactctggagaagtagaaaaagggcttcattgccaaaatcctgcaGCATCCCTTTAATGGAAGTTAGGATTTGTCCAAATCCATCTCGACTGGATCTTTTCCGTGTATattatttcaaatgttttttgtttgtttttgttttacagCAGCAAATGTATTATAAATAACCCAAACGGCTCTTAGTCTGACAAGATTGTTTTCTTCCAACTcccttaattaattaatttattctTCACTTTTTGAAGAATGCGTTTTGTATCGCATAATACTGTGGGAATTGTACATATCTACATATTATAGATTGTATTTTTAGAAATATGACATTTTGAATggttgaatgtgttttgtttattgttgttgtttataaatagatacagtatattttcTAGACTAAAGCTGGTACTAACCACCATAACCCGTATTTGACAGCCTGGTTCccgatctgtttgtgctgtcttggcATTGACCATCGGGCAGGGGTATTGAAATCCGAGCCTGGAGGTCCATAATACTGCTGGTTTTATGTTCCACCTGAAAATTGATTTCATCCACCTGGTGCCCCAGGTCTAAATCGGTCCTTGATTTAGAGGCAAtcagcagtggaactggcttcaaggtcaatgttttgaattggctatgttataggagttggcaagacagcacaaatatACCTGGAACCAGGCTACATATCTCCTCTAGGTTGTAATGTGACGTCTGAGAGAAACGATCCAAACCAGTATTATCTACGTCTTGTTGTCTGGGAGAAACGATCCAAACCAATGTTATCTACGGCTTGTTGTCTGGGAGAAACGATCCAAACCAGTGTTATCTACGGCTGGTTGTCTGAGAGAAACGATCCAAACCAGTGTTATCTACGGCTTGTTGTCTGGGAGAAACGATCCAAACCAGTGTTATCTACGGCTTGTTGTCTGGGAGAAACTATCCAAACCAGTGTTATCTACGGCTTGTTGTCTGGGAGAAACGATCCAAACCAGTGTTATCTACGGCTTGTTGTCTGGGAGAAACGATCCAAACCAGTGTTATCTACGGCTTGTTGTCTGAGAGAAACGATCCAAACCAGTGTTATCTACGGCTTGTTGTCTGGGAGAAACGATCCAAACCAGTGTTATCTACGGCTTGTTGTCTGGGAGAAACGATCCAAACCAGTGTTATCTACGGCTTGTAGTCGGAGAGAAACGATCCAAACCAGTGTTATCTACGGCTTGTAGTCGGAGAGAAACGATCCAAACCAGTGTTATCTACGGCTTGTTGTCTGAGAGAAACGATCCAAACCAGTGTTATCTACGGCTTGTTGTCTGGGAGAAACGATCCAAACCAGTGTTATCTACGGCTTGTAGTCGGAGAGAAACGATCCAAACCAGTGTTATCTACGGCTTGTAGTCGGAGAGACACGATCCAAACCAGTGTTATCTACGGCTTGTAGTCGGAGAGACACGATCCAAACCAGTGTTATCTACGGCTTGTTGTCTGGGAGAAACGATCCAAACCAGTGTTATCTACGGCTTGTTGTCTGTGAGAAAC

Function

symbol description
trabd2a Predicted to enable Wnt-protein binding activity and metalloendopeptidase activity. Predicted to be involved in head development and negative regulation of Wnt signaling pathway. Predicted to act upstream of or within Wnt signaling pathway and proteolysis. Predicted to be integral component of organelle membrane and integral component of plasma membrane. Orthologous to human TRABD2A (TraB domain containing 2A).

NR:

description
metalloprotease TIKI1-like

GO: NA

KEGG:

id description
K25185 TRABD2; metalloprotease TIKI

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036936776.1 False 4508 mRNA 0.47 7 6026192 6155861
XM_036936777.1 True 4447 mRNA 0.47 8 6026192 6155862
Loading

Neighbor

gene id symbol gene type direction distance location
LOC118937619 NA coding downstream 75825 5946358 ~ 5951183 (-)
rnf170 LOC106568562 coding downstream 137815 5879217 ~ 5888377 (-)
june LOC106568560 coding downstream 373229 5650123 ~ 5652963 (-)
LOC110536877 mob3b coding downstream 418456 5538381 ~ 5607736 (-)
LOC110536872 fsd1l coding downstream 643715 5293465 ~ 5382477 (-)
mbd2 LOC105008486 coding upstream 871240 7027102 ~ 7131151 (-)
wdr91 wdr91 coding upstream 991272 7147134 ~ 7182333 (-)
LOC110536889 NA coding upstream 1151758 7307620 ~ 7309017 (-)
LOC110536888 LOC106568538 coding upstream 1155823 7311685 ~ 7376933 (-)
LOC110536886 tcf4 coding upstream 1247263 7403125 ~ 7415816 (-)
G1032867 NA non-coding downstream 941 6023292 ~ 6025251 (-)
G1032868 NA non-coding downstream 3116 6022774 ~ 6023076 (-)
G1032860 NA non-coding downstream 17347 6008590 ~ 6008845 (-)
G1032852 NA non-coding downstream 30857 5994245 ~ 5995335 (-)
G1032847 NA non-coding downstream 38396 5983757 ~ 5987796 (-)
G1032923 NA non-coding upstream 6942 6162804 ~ 6164037 (-)
G1032967 NA non-coding upstream 97352 6253214 ~ 6345934 (-)
G1032943 NA non-coding upstream 109860 6265722 ~ 6269765 (-)
G1032978 NA non-coding upstream 112672 6268534 ~ 6274417 (-)
G1032995 NA non-coding upstream 152884 6308746 ~ 6309939 (-)
G1032314 NA other downstream 242828 5782940 ~ 5783364 (-)
G1032158 NA other downstream 488580 5535481 ~ 5537612 (-)
G1031871 slc46a2 other downstream 1194738 4830370 ~ 4831454 (-)
G1031855 NA other downstream 1223301 4797447 ~ 4802891 (-)
G1032941 NA other upstream 41155 6197017 ~ 6200334 (-)
LOC110523118 LOC106572051 other upstream 1565390 7645369 ~ 7821518 (-)
G1034443 yo84 other upstream 1672018 7827880 ~ 7834578 (-)
G1034667 NA other upstream 2123477 8279339 ~ 8279866 (-)
G1035160 NA other upstream 2680394 8836256 ~ 8838834 (-)

Expression

trabd2a(trabd2a) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 12.
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trabd2a(trabd2a) Expression in each Bioproject

Bar chart with 15 bars.
trabd2a(trabd2a) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 20.
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Co-expression Network