LOC118937621


Basic Information

Item Value
gene id LOC118937621
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 8278541 ~ 8288538 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005034853.1
AGTTTATATGGTATCAGGGTGAGGTGTAGTAGGTGTGGCTTTTCAAATGACCTTTGACCATTGACCAAGGGGTCGTGTATGTTTTATGATGATGAGGTAAATGTTCAATTTAAAAGTTTATTTTAATTTTGTTAAAGACAATACAAATCTAACTACATGTTTCTGAATCTGCACGTCTAACAGTGGTTCATATATTTGAACCACTGTTAGACGGATGATTTGaggcctgaatgctgattgactgaaAGCTGTGGAATGTCAGACcaacaaaatatttatttgtacCGCTCtagttacgttggtaaccagtttataatagcaataaggcacctcggggggttgTAATTTATGGCCGATATACCAAAAGGCAAAGGGCTGTGTCCTAGCACTCcgcaagaacagcccttagccgttgtttattggccatatatcactccccctcgggccttattgcttaaatatagcgTGTTGATTTGTTATTATGCATTACTGCATCCAGGAGCGCCTTCTTACGGTTTTCCTGCATGCTCAAGTCATTGTGATGCACTGGGAGAGGAGCGAGAAATCTCATCCAATAAAACAACCTGATCTCCGAAGTCCACGTTTTTAATCTCAATCACACACCGCGGGGCGGTACAGCACCGGTTACATTGGTGCCTTCTAGACCCGGATTCATCGATGATCAACGTCAGCTCGGTCACCGTGGAGCTGCTGCTCTAGAGACTGTTTACATCATGAGcaGCAGGCGGGTCTGAGTCTGCTGATCAGTGTGATCAAAGACCTCGTGGAAGACCTCAATCTGATTGGACACGGCTTCCTGGACTTGCTCAGCTCAACCCGCCCTGCCCTTTTCACTGTCCGTCTGAGCTGGATTCAAATAGTATTtgctttctttcaaatactttgagcatttgATTGATCCGGTCTGATGCACGGTTGCACATTATGGGACTATTGGACGGCAGGTAAAGTATTTTAAAATTAAAGGGATGTTTATTTAAACCAGGTCTGATGCTGATAACCATTGTTAAAGAGACATGCCACTTTGTTGGCAAcacatctctctttctgtgtttccCACTCAAAGCTCCCATCCATCTGAACTAAGATGTGACTGTTTTGAGTTGTTCAATATGTTGGGTGATATTCAACAAATAAATATGAGAATACTGCACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005034853.1 True 1176 mRNA 0.43 3 8278541 8288538

Neighbor

gene id symbol gene type direction distance location
LOC100136343 LOC100136343 coding downstream 25627 8246010 ~ 8252914 (-)
LOC110536914 LOC106568507 coding downstream 73148 8127848 ~ 8205393 (-)
LOC110536909 LOC106568505 coding downstream 297338 7978843 ~ 7981203 (-)
LOC101268972 LOC101448022 coding downstream 377626 7898867 ~ 7900915 (-)
stbd1 stbd1 coding downstream 426933 7837607 ~ 7851608 (-)
ptpn13 ptpn13 coding upstream 3013 8291551 ~ 8460671 (-)
arhgap24 arhgap24 coding upstream 305791 8594329 ~ 8809553 (-)
esm1 esm1 coding upstream 569093 8857631 ~ 8860067 (-)
LOC110536920 NA coding upstream 727458 9015996 ~ 9022222 (-)
hcn1 hcn1 coding upstream 749098 9018507 ~ 9206417 (-)
G1034655 NA non-coding downstream 21463 8255792 ~ 8257078 (-)
G1034654 NA non-coding downstream 21693 8256226 ~ 8256848 (-)
G1034649 NA non-coding downstream 34204 8243663 ~ 8244337 (-)
G1034644 NA non-coding downstream 45999 8231276 ~ 8232542 (-)
G1034610 NA non-coding downstream 52034 8225918 ~ 8226507 (-)
G1034522 NA non-coding upstream 18489 8307027 ~ 8307650 (-)
G1034696 NA non-coding upstream 76508 8365046 ~ 8369169 (-)
G1034718 NA non-coding upstream 128797 8417335 ~ 8418652 (-)
G1034746 NA non-coding upstream 193378 8481916 ~ 8483916 (-)
G1034748 NA non-coding upstream 196131 8484669 ~ 8485498 (-)
G1034443 yo84 other downstream 443963 7827880 ~ 7834578 (-)
LOC110523118 LOC106572051 other downstream 496503 7645369 ~ 7821518 (-)
G1032941 NA other downstream 2078207 6197017 ~ 6200334 (-)
G1032314 NA other downstream 2495177 5782940 ~ 5783364 (-)
LOC110536877 mob3b other downstream 2734033 5538381 ~ 5607736 (-)
G1035160 NA other upstream 547718 8836256 ~ 8838834 (-)
G1035717 NA other upstream 1244962 9533500 ~ 9548135 (-)
LOC110536932 NA other upstream 1397491 9684834 ~ 9696461 (-)
sema4d sema4d other upstream 1616766 9901109 ~ 9983793 (-)

Expression


Co-expression Network