Gene
RNA
| Item | Value |
|---|---|
| gene id | arhgap24 |
| gene name | arhgap24 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 8594329 ~ 8809553 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| arhgap24 | Predicted to enable GTPase activator activity. Predicted to be involved in several processes, including activation of GTPase activity; negative regulation of Rac protein signal transduction; and negative regulation of ruffle assembly. Predicted to act upstream of or within signal transduction. Predicted to be active in focal adhesion. Orthologous to human ARHGAP24 (Rho GTPase activating protein 24). |
| description |
|---|
| rho GTPase-activating protein 24 isoform X2 |
| id | description |
|---|---|
| K20642 | ARHGAP22_24_25; Rho GTPase-activating protein 22/24/25 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036936832.1 | False | 4443 | mRNA | 0.49 | 9 | 8594329 | 8634808 |
| XM_021622595.2 | False | 4694 | mRNA | 0.49 | 10 | 8594329 | 8645982 |
| XM_036936831.1 | False | 4767 | mRNA | 0.49 | 11 | 8594329 | 8774768 |
| XM_036936830.1 | True | 3055 | mRNA | 0.55 | 12 | 8596735 | 8809553 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ptpn13 | ptpn13 | coding | downstream | 133658 | 8291551 ~ 8460671 (-) |
| LOC118937621 | NA | coding | downstream | 305791 | 8278541 ~ 8288538 (-) |
| LOC100136343 | LOC100136343 | coding | downstream | 341415 | 8246010 ~ 8252914 (-) |
| LOC110536914 | LOC106568507 | coding | downstream | 388936 | 8127848 ~ 8205393 (-) |
| LOC110536909 | LOC106568505 | coding | downstream | 613126 | 7978843 ~ 7981203 (-) |
| esm1 | esm1 | coding | upstream | 48078 | 8857631 ~ 8860067 (-) |
| LOC110536920 | NA | coding | upstream | 206443 | 9015996 ~ 9022222 (-) |
| hcn1 | hcn1 | coding | upstream | 228083 | 9018507 ~ 9206417 (-) |
| LOC110536926 | grp | coding | upstream | 752550 | 9562103 ~ 9564000 (-) |
| LOC110536932 | NA | coding | upstream | 876736 | 9684834 ~ 9696461 (-) |
| G1034777 | NA | non-coding | downstream | 6364 | 8532691 ~ 8587965 (-) |
| G1034782 | NA | non-coding | downstream | 7890 | 8583352 ~ 8586439 (-) |
| G1034793 | NA | non-coding | downstream | 35907 | 8555914 ~ 8558422 (-) |
| G1034781 | NA | non-coding | downstream | 54952 | 8537784 ~ 8539377 (-) |
| G1034751 | NA | non-coding | downstream | 105076 | 8487828 ~ 8489253 (-) |
| G1034926 | NA | non-coding | upstream | 319 | 8809872 ~ 8810077 (-) |
| G1034931 | NA | non-coding | upstream | 3028 | 8812581 ~ 8812798 (-) |
| G1034935 | NA | non-coding | upstream | 4147 | 8813700 ~ 8813924 (-) |
| G1034936 | NA | non-coding | upstream | 4521 | 8814074 ~ 8814302 (-) |
| G1034947 | NA | non-coding | upstream | 10661 | 8820214 ~ 8820703 (-) |
| G1034667 | NA | other | downstream | 314463 | 8279339 ~ 8279866 (-) |
| G1034443 | yo84 | other | downstream | 759751 | 7827880 ~ 7834578 (-) |
| LOC110523118 | LOC106572051 | other | downstream | 812291 | 7645369 ~ 7821518 (-) |
| G1032941 | NA | other | downstream | 2393995 | 6197017 ~ 6200334 (-) |
| G1032314 | NA | other | downstream | 2810965 | 5782940 ~ 5783364 (-) |
| G1035160 | NA | other | upstream | 26703 | 8836256 ~ 8838834 (-) |
| G1035717 | NA | other | upstream | 723947 | 9533500 ~ 9548135 (-) |
| sema4d | sema4d | other | upstream | 1095751 | 9901109 ~ 9983793 (-) |
