esm1 (esm1)


Basic Information

Item Value
gene id esm1
gene name esm1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 8857631 ~ 8860067 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021622597.2
GGGGACAGGCTGGCAACTAGACTAGATGACAACACCGGATTGAGGAAATTGACGAGGGCAAACCATGTGGGGAAAAAACAAACTTGTTTTTAAGCCGATATAACCATGCAACCTCGTGTATTAAGCCACTCCATTCAAGCAGCGACGTCGTCAGCCCAGAACAGCTCTTCTGAACATCCAAGGCACCCCGTGCTAAATCTTATCCAAAGATGTATTTTCTCCTTTTCACAGTCTTCTCCATATTCATAGTGCGTAATGTTGAGGCTTGGGGAGCAAGTGTCAAGTACGCGGTGAACTGCCCGGAGCGGTGCAATGTGGATCTGTGCGGCTTGACGCAGCGCTGCAGACGGACTGTGCTGGATGACTGCGGTTGTTGTCAGGTCTGTGCGGCAGACAGAGGGGAACACTGCTATCGCACTGTGTCTGGGATGCACGGAGTCAAGTGCGGACCGGGATTATTCTGCGAGTTCTACAAAGATGAGGACGACTATGGAGATGAATATGGCATCTGCAAAGATTGCATGTATGGAACCTATGGGGTAGGGTGTGGTAAAACATGCCATTGCAAAGCTGGAGGTATctgtgacagagagacaggagcctGCCTCACCTTCAAATTCTTCACCAAAATCGCCAGCAAGCTGAAGACACAGCACCCCAATGCAGGAGGTGAGATTGGTTCAGGAGATGACAGCACCAGTCTGAATGGGGAAcgatccactgctccaaagtggTTAACACCTCGCTGACACTCATTATCAAGACTTAGTTTATTCTGTGTAAATGTAGAAAGCATAGTAGTAAATTAAATGATTGGAGGATATattttattatgtattattaagAAAACACATTTTCTACAAGATGATTGAATGTTTTGAGCATCTCTGTTGTGGTGTTTCTATTTTGTACCAGTGCCCCATCATGTCATAAGAGTTGTGTTGTACCAAACGAAGGGAGGTCAAATGTACCAAAGTTCAAATATATGTTTATTCTACTTTTATACAAAGTATGAATATATCTAGAATGTCTATGATGACCTCTATGACGAGCTAACATTCTAGCAATGCTGCATTCACTTCTTCATAATTGAGATCATTTGGTTCAATCAAATTATGTGAAAATGTTGTGCTGATATGACATGACCCCCCCAGGgatataaaataataaataatatattgtcTCATCCTTTTCTTCTAGAAGTATCTACTGTGATCTGTGCTTtttaattgtttgtttgtttgtttgattgattgattgtttgattgattgattgtttgtttgattgattgattgattgttcttTACTGATAATCTCTTATTTTTCTTTCACCTGTGATCACATggatcaatatatatatattatatattatgtcATATCACCTGCCAATGTACAGTATGGTCTTACAAATAAACCAAAGTTGACCTGGAAA

Function

symbol description
esm1 Predicted to enable insulin-like growth factor binding activity. Predicted to be located in extracellular region. Orthologous to human ESM1 (endothelial cell specific molecule 1).

NR:

description
endothelial cell-specific molecule 1

GO:

id name namespace
GO:0001558 regulation of cell growth biological_process
GO:0005576 extracellular region cellular_component
GO:0005520 insulin-like growth factor binding molecular_function

KEGG:

id description
K25036 ESM1; endothelial cell-specific molecule 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021622597.2 True 1433 mRNA 0.41 3 8857631 8860067

Neighbor

gene id symbol gene type direction distance location
arhgap24 arhgap24 coding downstream 48078 8594329 ~ 8809553 (-)
ptpn13 ptpn13 coding downstream 396960 8291551 ~ 8460671 (-)
LOC118937621 NA coding downstream 569093 8278541 ~ 8288538 (-)
LOC100136343 LOC100136343 coding downstream 604717 8246010 ~ 8252914 (-)
LOC110536914 LOC106568507 coding downstream 652238 8127848 ~ 8205393 (-)
LOC110536920 NA coding upstream 155929 9015996 ~ 9022222 (-)
hcn1 hcn1 coding upstream 177569 9018507 ~ 9206417 (-)
LOC110536926 grp coding upstream 702036 9562103 ~ 9564000 (-)
LOC110536932 NA coding upstream 826222 9684834 ~ 9696461 (-)
nedd4l nedd4l coding upstream 835015 9695082 ~ 9803536 (-)
G1035168 NA non-coding downstream 5374 8851866 ~ 8852257 (-)
G1035167 NA non-coding downstream 7540 8849054 ~ 8850091 (-)
G1035158 NA non-coding downstream 22274 8835122 ~ 8835357 (-)
G1034963 NA non-coding downstream 25440 8831648 ~ 8832191 (-)
G1034953 NA non-coding downstream 32148 8825159 ~ 8825483 (-)
G1035170 NA non-coding upstream 3046 8863113 ~ 8865691 (-)
G1035180 NA non-coding upstream 23494 8883561 ~ 8884749 (-)
G1035245 NA non-coding upstream 117780 8977847 ~ 8978047 (-)
G1035246 NA non-coding upstream 118097 8978164 ~ 8978380 (-)
G1035160 NA other downstream 18797 8836256 ~ 8838834 (-)
G1034667 NA other downstream 577765 8279339 ~ 8279866 (-)
G1034443 yo84 other downstream 1023053 7827880 ~ 7834578 (-)
LOC110523118 LOC106572051 other downstream 1075593 7645369 ~ 7821518 (-)
G1032941 NA other downstream 2657297 6197017 ~ 6200334 (-)
G1035717 NA other upstream 673433 9533500 ~ 9548135 (-)
sema4d sema4d other upstream 1045237 9901109 ~ 9983793 (-)
LOC110536951 cr032 other upstream 1990135 10850171 ~ 10860150 (-)

Expression


Co-expression Network