LOC110536783 (LOC106568425)


Basic Information

Item Value
gene id LOC110536783
gene name LOC106568425
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 12247792 ~ 12282813 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036936938.1
ctctttcaattcagtttcaatttaaggggctttgttggcatggtaaacatatgtttctccctctctctgtgcccatCTCTCTCACTTTATAGCTGGGTTcaatctttctctctgctctctctctctctctctctctctctctctctctctctctctctctttctctttctctttctctctcctctctcctctctcttttctcccaatGTTTCTTCGGACACTTTAAAATAACTTTTATGAATAAGCCATTATAAACACTTATAAGTGTGTATAAATGTTTTATGAATTATTATAAATGTTATATTATAATTCCGTATGCATTGTAAGGAGTATAACACCTATGCATTCTTATAGCTCTTATAGCTTACAGACACATTTCGCATGTTGATGAGGCCGTGCTGCTGAAATACACAAACAGCCGCGAGAAATGTCTGAAATAGGCTATAAAGACAGACAATGTTGAAATCTACCAAAATGGacagaaatataacaaaacttGCAGTGAGAGTAAACTAGTCTAGCCTATAAATTTGCAGCGGCTCATAACCGCTTCACGAAAAGTGAGCAATTAAGGTGATGCGTTTCTATGATCATACATCCTGTCGAAGATGAGAATAGGACAGAGGTGTCGAATCTAACTCTTAGGGATGCTCTTCACGTCGACATCTCAAGAGTCGATACTGTAATGATTCAACTTGTCACAGTTTTACAACAGCCATATACTACATGAACATTTGGGCATAGGCTACGAGGAGCGCTGACTTTAATGACCACTTTCTCTGCTCTGTCTGCTCAGCCGCGGTTTACTCTATTCAGCGGTGAGATTTTCGTAGGTTTCTTTCTTCTGTCTCAATCTCAACGCTTACGATTGGAGCACCACCAATGCCGATAATTTTTTAGCCTGCTGATTTCCATTTGCGCTGGGAGCGCGAGGAAATACGCTACACAGCTAGGTTATAAAGAACAAGCCGCCAAGTACAGGAATTATAGGGCGACTACCCGAGTGTCAGGAATACGGGCTACATTCGCTGATGGACTAACCGAACCAACTGCAGCCACAAGCCTACCAGTGGAGCCAAAACCGGGAGGGGAGAAAGAACAGTTTCAATTCACTGACGGTTATTTCTCAAAGGACCCCCGGGACAGGAAATCTGACCACTTCTAATTGTGGAAAACTGCTTTGTGACCGTTACACATGCTTTTGTTTTGCGCGGTATGGGTGTAAGGACCGTATTTAAAGATACCCAGCAGATACCAGGCAGTCACAATACAACCTATCAAACTCCGTCCAACCGGGCGCTGGTGGTATATGGCTGCATGCATTATCAGAACATATATGTTTGTCGTTTCTTTGGACGTATTTTGAGATTATTTTAAGCAGCTTTGGATACTTTGTTTTTGCGTTGCATGTGAATTGAAAGGAGCCTGGAATTGGCCTTTATATGACTTTTCTATCCTATATGAAGGAGTTGGATAGCGGAACGAGAGGAGAGCGACACAAACAAACAACGGGGACTCAACACTATTCATATTGAGATCATTTCGTTGTGATTTTAGTAGACATTATTAACTAATATTTTAGTCTATGCCTTAAATTCATTTTATAGTTCGTATTAAATAGTTATTAATGTAACGTTTTGTTTTGGACACTTTTCCATACGGGGTGTCGGTCATATGGTGAAACTGGAGGGGTTAACATAACTGTTATGGTTTCAGTCAAACAGTGACAGAAATAAACTAATCATTATCACCCAAGTCTGCCCGCGACCCTTCGGTGACTCACGTGCCAGCCTCAGTGATGGTCGGAATAGAGATCTAACAAGACAACAACCCTGCTGATGCGACCAGGTACATTACAAATATCTGTGAAGGCTGTTGATGGAGAGGATTTCGAATGACAGCCGGGACAGTGGTCATCACAGGCGGTATTTTAGCTACAGTTATCTTACTGTGCATCATCGCAGTACTGTGTTACTGTAGACTGCAGTATTATTGCTGTAAGAAGGAGGAGTTGGAGTCGGAGGAGGAGGAGCCCGACTTTGCAGTGACATCCCGCCTCCCGCCAGTCCACTCCAACCATAACATCGTGGCGGCGTCGGTCGCCGCCTCCACCCCTAACGGCCCCGCCCTCTTCACACCGCCTTTAGCGCGGAAACTAACGCGCTCGCAGACATTTTGCCCTTCGTGCACACACCATGATGTGCCCTTCTACCTGCAGCATCCGGACGGCCTGCGGAACGGCGGCGACCGCATCAGCTACCGTAGCATCCAACAGCATGACCTGGAACTGCCCTTAGAAATGCCCAGCTACCACAAACTGAACCTGACCCGGTCAGTCACCATGAGGGACATGTTCAACCGCAGCTGCAGCATTAGCACTGACGTCTAGTGGTATCGGCGACACCCCGTGGCATAGAGGGCTCATGGAAACAGATAGATAAATACAATGGGGACAGATAGTGGGACTGCAGCTCGACAACCACTGCTCCATGTCCCTCGGTCTTATGCTGAGATATAACCGCAAAAGATAAGCATTGAAAAAatccatcctctcctcatccGCTTGCTCTGTGGTGAGTAGGATGTTGACCCTCAAATAAAACAGTTTCTACTCTGTCTGGACTCGTATTGGATTACCCTAAACCTAAACGGTCAAACTAAACCACCCTCCGGTCTAACTAAATCCCCTCCGGTCTAACTAAACCACCCTCCGGTCTAACTAAACCACCCTCTGGTCTAACTAAACCACCCTCTGGTCTAACTAAATCCCCTCCGGTCTAACTAAACCATCCTCCAGTCAAACTAAATCCCCTCCGGTCTAACTAAATCCCCTCCGGTCTAACTAAATCCCCTCCGGTCTGATTCCACCACATCAACTGTACCTTTGAATAATAAATACCAGACTTTCTGTAGTTGCTGCTAAATAAACCAAGAAACCATGGTGATAAGGATAAATAAGAGGGCTATGGAGCCTCCTCCCACTCCTGCCACTCTCCACCAATCCCCAGCctgatcaagagagagagagagagagagtgtgtgagagagagagagtgagagagagtgtgtgagagagagggagtg

Function

NR:

description
PREDICTED: protein FAM163B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036936938.1 True 3084 mRNA 0.45 3 12247792 12282813

Neighbor

gene id symbol gene type direction distance location
LOC110536982 LOC106568426 coding downstream 52339 12165715 ~ 12195453 (-)
ambp ambp coding downstream 98591 12144886 ~ 12149201 (-)
LOC110536978 LOC106568447 coding downstream 212908 12019437 ~ 12034884 (-)
LOC110536975 NA coding downstream 242962 11973329 ~ 12004830 (-)
LOC110536972 LOC106568442 coding downstream 286585 11891370 ~ 11961207 (-)
LOC110536785 LOC106568423 coding upstream 220246 12503059 ~ 12522639 (-)
LOC118937673 NA coding upstream 264503 12547316 ~ 12549945 (-)
LOC110536786 LOC106561608 coding upstream 358114 12640927 ~ 12758875 (-)
trnaa-ugc-52 NA coding upstream 654135 12936948 ~ 12937021 (-)
LOC110536788 rabgap1 coding upstream 798587 13081400 ~ 13255741 (-)
G1038564 NA non-coding downstream 16333 12202314 ~ 12231459 (-)
G1038557 NA non-coding downstream 68639 12178804 ~ 12179153 (-)
G1038556 NA non-coding downstream 70905 12176400 ~ 12176887 (-)
G1038525 NA non-coding downstream 104962 12140405 ~ 12142830 (-)
G1038545 NA non-coding downstream 114852 12132620 ~ 12132940 (-)
G1038657 NA non-coding upstream 94772 12377585 ~ 12395184 (-)
G1038667 NA non-coding upstream 119217 12402030 ~ 12408761 (-)
G1038703 NA non-coding upstream 179627 12462440 ~ 12546806 (-)
G1038714 NA non-coding upstream 190339 12473152 ~ 12477603 (-)
G1038715 NA non-coding upstream 193178 12475991 ~ 12479918 (-)
G1038295 NA other downstream 509015 11666987 ~ 11738777 (-)
G1038258 NA other downstream 631849 11606351 ~ 11615943 (-)
LOC110536956 LOC106568459 other downstream 1016960 11212672 ~ 11231102 (-)
G1037217 NA other downstream 1141472 11105935 ~ 11106320 (-)
G1037216 NA other downstream 1144344 11103084 ~ 11103448 (-)
G1038606 NA other upstream 6711 12289524 ~ 12292538 (-)
G1038943 NA other upstream 437688 12720501 ~ 12721154 (-)
G1039364 NA other upstream 864845 13147658 ~ 13176443 (-)
G1039366 NA other upstream 868208 13151021 ~ 13152307 (-)
LOC110536986 LOC106568381 other upstream 1038397 13321118 ~ 13324415 (-)

Expression


Co-expression Network