LOC118937673


Basic Information

Item Value
gene id LOC118937673
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 12547316 ~ 12549945 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036937594.1
ATGGCTGTCAGACAGACGGGGGCTGTGGTTTGTGGAGTCTCTGTCTTCCTCACCCATCCCAGGCTGACGTCTGATtggacagagacgggggctgtgAGGAACCAGGACAACGAGCTAGAGGACCAGGACAACGAGCTAGAGGACCAGGACAACGAACTAGAAGACCAGGACAACGAGCTAGAGGACCAGGACAACGAGCTAGAGGACCAGGACAACGAGCTAGAGGACCAGGAAAACGAGCTAGAGGACCAGGACAATGAACTAGATGACCAGGACAACGAGCTAGAGTACCAGGACAACAAGCTAGAGGACCAGGACAACGAGCTAGAGTACAAGGAAAACGAGCTAGAGGACCAGGACAACGAGCTAGAGGATCAGGACAACGAGCTAGAGGATCAGGACAATGAGCTAGAGGACCAGGACAACGAGCTAGAGGATCAGGACAACGAGCTAGAGGACCAGGACAACGAGCTAGAAGACCAGGACAACGAGCTAGAGGACCAGGACAATGAGCTAGATGACCAGGACAACGAGCTAGAGTACCAGGACAACGAGCTAGAGGACCAGGACAATGAGCTAGAGTACAAGGAAAACGAGCTAGAGGACCAGGACAACGAGCTAGAGGATCAGGACAACGAGCTAGAGGATCAGGACAATGAGCTAGAGGACCAGGACAACGAGCTAGAGGATCAGGACAACGAGCTAGAGGACCAGGACAACGAGCTAGAAGACCAGGACAACGAGCTAGAGGACCAGGACAACGAGCTAGAGGACCAGGACAACATAGTGTTATTCTCTACTCTCCATAGAGGTtagaatacagtgcattcggaaagtattcagacccatgaactttttccacattttgttacgttacagcctcattcta

Function

NR:

description
PREDICTED: keratin-associated protein 5-4-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036937594.1 True 889 mRNA 0.52 2 12547316 12549945

Neighbor

gene id symbol gene type direction distance location
LOC110536785 LOC106568423 coding downstream 24677 12503059 ~ 12522639 (-)
LOC110536783 LOC106568425 coding downstream 264503 12247792 ~ 12282813 (-)
LOC110536982 LOC106568426 coding downstream 351863 12165715 ~ 12195453 (-)
ambp ambp coding downstream 398115 12144886 ~ 12149201 (-)
LOC110536978 LOC106568447 coding downstream 512432 12019437 ~ 12034884 (-)
LOC110536786 LOC106561608 coding upstream 90982 12640927 ~ 12758875 (-)
trnaa-ugc-52 NA coding upstream 387003 12936948 ~ 12937021 (-)
LOC110536788 rabgap1 coding upstream 531455 13081400 ~ 13255741 (-)
LOC110536985 LOC106568377 coding upstream 628778 13178723 ~ 13184969 (-)
LOC110536789 LOC106568378 coding upstream 725224 13275169 ~ 13318946 (-)
G1038751 NA non-coding downstream 253 12546836 ~ 12547063 (-)
G1038703 NA non-coding downstream 510 12462440 ~ 12546806 (-)
G1038730 NA non-coding downstream 36393 12505259 ~ 12510923 (-)
G1038729 NA non-coding downstream 36869 12504893 ~ 12510447 (-)
G1038715 NA non-coding downstream 67398 12475991 ~ 12479918 (-)
G1038767 NA non-coding upstream 76070 12626015 ~ 12626280 (-)
G1038769 NA non-coding upstream 77734 12627679 ~ 12627979 (-)
G1038885 NA non-coding upstream 85335 12635280 ~ 12635479 (-)
G1038887 NA non-coding upstream 88116 12638061 ~ 12639005 (-)
G1038606 NA other downstream 254778 12289524 ~ 12292538 (-)
G1038295 NA other downstream 808539 11666987 ~ 11738777 (-)
G1038258 NA other downstream 931373 11606351 ~ 11615943 (-)
LOC110536956 LOC106568459 other downstream 1316484 11212672 ~ 11231102 (-)
G1037217 NA other downstream 1440996 11105935 ~ 11106320 (-)
G1038943 NA other upstream 170556 12720501 ~ 12721154 (-)
G1039364 NA other upstream 597713 13147658 ~ 13176443 (-)
G1039366 NA other upstream 601076 13151021 ~ 13152307 (-)
LOC110536986 LOC106568381 other upstream 771265 13321118 ~ 13324415 (-)
G1039504 NA other upstream 805355 13355300 ~ 13355795 (-)

Expression


Co-expression Network