Gene
RNA
| Item | Value |
|---|---|
| gene id | trnaa-ugc-52 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 12936948 ~ 12937021 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| trnaa-ugc-52 | True | 74 | mRNA | 0.58 | 1 | 12936948 | 12937021 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536786 | LOC106561608 | coding | downstream | 178073 | 12640927 ~ 12758875 (-) |
| LOC118937673 | NA | coding | downstream | 387003 | 12547316 ~ 12549945 (-) |
| LOC110536785 | LOC106568423 | coding | downstream | 414309 | 12503059 ~ 12522639 (-) |
| LOC110536783 | LOC106568425 | coding | downstream | 654135 | 12247792 ~ 12282813 (-) |
| LOC110536982 | LOC106568426 | coding | downstream | 741495 | 12165715 ~ 12195453 (-) |
| LOC110536788 | rabgap1 | coding | upstream | 144379 | 13081400 ~ 13255741 (-) |
| LOC110536985 | LOC106568377 | coding | upstream | 241702 | 13178723 ~ 13184969 (-) |
| LOC110536789 | LOC106568378 | coding | upstream | 338148 | 13275169 ~ 13318946 (-) |
| LOC110536986 | LOC106568381 | coding | upstream | 384097 | 13321118 ~ 13324415 (-) |
| LOC110536988 | LOC106568382 | coding | upstream | 398780 | 13335801 ~ 13354661 (-) |
| G1039286 | NA | non-coding | downstream | 10468 | 12920096 ~ 12926480 (-) |
| G1039004 | NA | non-coding | downstream | 92946 | 12842259 ~ 12844002 (-) |
| G1038999 | NA | non-coding | downstream | 97299 | 12839341 ~ 12839649 (-) |
| G1038998 | NA | non-coding | downstream | 98626 | 12838071 ~ 12838322 (-) |
| G1038970 | NA | non-coding | downstream | 169197 | 12766523 ~ 12767751 (-) |
| G1039297 | NA | non-coding | upstream | 13946 | 12950967 ~ 12957621 (-) |
| G1039313 | NA | non-coding | upstream | 49840 | 12986861 ~ 12987240 (-) |
| G1039331 | NA | non-coding | upstream | 80273 | 13017294 ~ 13017548 (-) |
| G1039338 | NA | non-coding | upstream | 99282 | 13036303 ~ 13038178 (-) |
| G1039358 | NA | non-coding | upstream | 198769 | 13135790 ~ 13136822 (-) |
| G1038943 | NA | other | downstream | 215794 | 12720501 ~ 12721154 (-) |
| G1038606 | NA | other | downstream | 644410 | 12289524 ~ 12292538 (-) |
| G1038295 | NA | other | downstream | 1198171 | 11666987 ~ 11738777 (-) |
| G1038258 | NA | other | downstream | 1321005 | 11606351 ~ 11615943 (-) |
| LOC110536956 | LOC106568459 | other | downstream | 1706116 | 11212672 ~ 11231102 (-) |
| G1039364 | NA | other | upstream | 210637 | 13147658 ~ 13176443 (-) |
| G1039366 | NA | other | upstream | 214000 | 13151021 ~ 13152307 (-) |
| G1039504 | NA | other | upstream | 418279 | 13355300 ~ 13355795 (-) |
| G1040300 | NA | other | upstream | 1241637 | 14178658 ~ 14180141 (-) |
