LOC110536999


Basic Information

Item Value
gene id LOC110536999
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 13592825 ~ 13595786 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036936978.1
CACTCATTAGAATACTGTGTAGAGTGAATTCCAACGTTGGCGTGATCCATCAAAAACCAGGGTTTCTCTATCGCCTGAGGTAGCAGAAAAGCGCGTTTATGGCACACACACGCGTTTGTCGTCGTGGCCTCGGGGCATGCACACCAGAACATCACCCACCGTCACCTAAATACACTATATTTCGTCCCTATTTACCAAATGTCATGAATTCAATATCCAATCGAAATTGACTTCTTCTACACTGGCCCCTGACACCCATGACCTCTTTAGACTGTCCACCGACACTCTCCGATTGTCAGAGATCATTCATGTAACCTAGCTAACAAGAGGATAAAGGAGGAGCGGAGAACTGTCAAATCTCATTGTACAGATTAGACTAGATTACAAAACCAGCTCCTCCAGTAGACCAGTCCCATTGCAGGTGTTGGTGGGCATCTACAAGAAACCGCGCGCTGTATAATAAACGCAAGGACAGTGCAAATAGGTGAAGAGCAAACCTTATCGTCgatttttttgtattgttttggATTTAGAGTGGTTTACGCACGGTTTCTTTGGCGTTTGCCAAACTCATTTTAAAATGATGTATTCTCAATTGTTAGCCTAATAATATAAATTAAATGTTTATCAGGAGACCCTGGAGGCAGATATTCTGTCGAAACTATTTTGGAACGCAGAGGCGAGAGCTCAGCAACGATGGATAACTGACATTTTTACGCGCGTCCGTACTCCTACGACGTTCCCGAGAACGCCGTTTTTGGACCGTATGAGCTGAAACACACATCCGTTTATGACAGCATCGCCTTCACTGCTCTCAAGTCTATGGACCGAAGAACGGCACCATACATTTTGAGGAGACCCGTTTCTATTTGGCTACACAGGCAGACGCCTCAGCGCATTGATGGTCCAATGTGGCTGCGGCTGGTCCAGTCAGCCTGGAGCGCTGAAGAACAGAACCTGGAGCACTATGTGAAGAACGGACACCTATTCTTTAGGGCCCTCAGGACGACCCAGAAGGAAGAGGAGCGGTTGGTGTGGTACGGGAAAGACCTGGCCAAGCTTCTTCTCCTAAACCCACTGCAGATACAAAGCAAAGGTACTGGTCCGTACACATGTGCCAACTGTAACCAATGCTTTGAGACTGAGTTCTGCACACAGAGACAACCAAACAGCCACAGCACCAAACCTGGTCAAAGCAACACTGACCATGCGAAACCTGACTCCCTTCCTGCTCCTGCCTTCAAACAGAGCCGTCCAGAAACAAGTCCACTGGATAGCAAACCTGCAACAGACTTCCATAACTTAGCCCGGGATATGGATAATATTAAGACAGGGTCTTCCAGCACCAGGGACTCTGAGACTAGAGGTTCCCTCATAGGGAAACGCacagaggtagaggaggacaggTGCAGTGAGCCAGCATCTGGTGATAACGCAGGATCCACTGGACACAGGATACTGTACTTTGACCATGAAAAGACAACCCAGCCCAGTCTCCCGTCACCTGTCCAGTAACATCAACAAGAACAACATCACCAAAGACAGAGCAACCCAACTACACTTACACGGTTCTTGGCCTGAAGACCTCAGATCTTCATCCAGCCTAAGGAACCAGAGCATCCAGCCCGGTAGTGACTGTCACCTCTGCCTTCAGCCAGGTCTCTGTCTGAGAACAGGAGGAGTAACTTCTCCCAGCCCCCACGCTCTGTTTTCTTTCCCCAGAGTACCCCCCTGCTTGGGAGGGCTTAAACTTCAATCACTCCCTTTACTACTGATCTCCACCGACCCAGGGTGTTTCGAAACAGAGGCGCCCTCTATACAGCCCAGCAGCTCTCTGGACCAGGACCACAGGCTGATCCCACCCCCAGATTACCCTATCCCCGGTgctcctgtccccctccttctCACGGCTCTCGCCCCTCTGCCTGACGGCTCAGAACTGGTGTGCCAAATGCAACGTCTCCTTCCGCCTGACCTCAGACCTGGTGCAACAATGAGGTCCCACCACAAGAGGGCGGTGGACGCCACagagtcagggtctggggtgAAACAACAGCAGCAAGGGCGAGAGAGGAGAGGCTCAAGTCATGCATCTACGAGGTCTTCAGACAACGCCATCACCTTGCGGGACACTTGACCTCTCACACATGAGTTCAGTTCAATTAGTTATTATCATTGGTAAGATCTTGATATTTGAATGTGTCATCATATTGATGAAGATACTAATTGGAGAACTAAAACAAACGATGTTAATTATAATAATGTAAATTATCAAGACGATGACATTTTCTCAGAATTCTGTAAAATGTGTCATTTTTTGAATGCCATATATTTTTCCATTCTTTTACATCAAATGCTTGTGTTCCACACAAATTGCAATATTTGAGGTGTTATGACTTGATTGTAAGGTCAGTTGCGAACACTAGATGGTGCCAGAGAGCTATTTACAGGGACAGAAAAAAAACTCGCTTCAATTTTTCAATTTTATTTTGAAAGAAAAATATACCTATTATTTCATAAGAACTTCATATAGAGTACCCTGATAAGTaacacatgggggggggggggg
>XM_021622692.2
ATTAGAATACTGTGTAGAGTGAATTCCAACGTTGGCGTGATCCATCAAAAACCAGGGTTTCTCTATCGCCTGAGGTAGCAGAAAAGCGCGTTTATGGCACACACACGCGTTTGTCGTCGTGGCCTCGGGGCATGCACACCAGAACATCACCCACCGTCACCTAAATACACTATATTTCGTCCCTATTTACCAAATGTCATGAATTCAATATCCAATCGAAATTGACTTCTTCTACACTGGCCCCTGACACCCATGACCTCTTTAGACTGTCCACCGACACTCTCCGATTGTCAGAGATCATTCATGTAACCTAGCTAACAAGAGGATAAAGGAGGAGCGGAGAACTGTCAAATCTCATTGTACAGATTAGACTAGATTACAAAACCAGCTCCTCCAGTAGACCAGTCCCATTGCAGGTGTTGGTGGGCATCTACAAGAAACCGCGCGCTGTATAATAAACGCAAGGACAGTGCAAATAGGTGAAGAGCAAACCTTATCGTCgatttttttgtattgttttggATTTAGAGTGGTTTACGCACGGTTTCTTTGGCGTTTGCCAAACTCATTTTAAAATGATGTATTCTCAATTGTTAGCCTAATAATATAAATTAAATGTTTATCAGGAGACCCTGGAGGCAGATATTCTGTCGAAACTATTTTGGAACGCAGAGGCGAGAGCTCAGCAACGATGGATAACTGACATTTTTACGCGCGTCCGTACTCCTACGACGTTCCCGAGAACGCCGTTTTTGGACCGTATGAGCTGAAACACACATCCGTTTATGACAGCATCGCCTTCACTGCTCTCAAGTCTATGGACCGAAGAACGGCACCATACATTTTGAGGGCAGACGCCTCAGCGCATTGATGGTCCAATGTGGCTGCGGCTGGTCCAGTCAGCCTGGAGCGCTGAAGAACAGAACCTGGAGCACTATGTGAAGAACGGACACCTATTCTTTAGGGCCCTCAGGACGACCCAGAAGGAAGAGGAGCGGTTGGTGTGGTACGGGAAAGACCTGGCCAAGCTTCTTCTCCTAAACCCACTGCAGATACAAAGCAAAGGTACTGGTCCGTACACATGTGCCAACTGTAACCAATGCTTTGAGACTGAGTTCTGCACACAGAGACAACCAAACAGCCACAGCACCAAACCTGGTCAAAGCAACACTGACCATGCGAAACCTGACTCCCTTCCTGCTCCTGCCTTCAAACAGAGCCGTCCAGAAACAAGTCCACTGGATAGCAAACCTGCAACAGACTTCCATAACTTAGCCCGGGATATGGATAATATTAAGACAGGGTCTTCCAGCACCAGGGACTCTGAGACTAGAGGTTCCCTCATAGGGAAACGCacagaggtagaggaggacaggTGCAGTGAGCCAGCATCTGGTGATAACGCAGGATCCACTGGACACAGGATACTGTACTTTGACCATGAAAAGACAACCCAGCCCAGTCTCCCGTCACCTGTCCAGTAACATCAACAAGAACAACATCACCAAAGACAGAGCAACCCAACTACACTTACACGGTTCTTGGCCTGAAGACCTCAGATCTTCATCCAGCCTAAGGAACCAGAGCATCCAGCCCGGTAGTGACTGTCACCTCTGCCTTCAGCCAGGTCTCTGTCTGAGAACAGGAGGAGTAACTTCTCCCAGCCCCCACGCTCTGTTTTCTTTCCCCAGAGTACCCCCCTGCTTGGGAGGGCTTAAACTTCAATCACTCCCTTTACTACTGATCTCCACCGACCCAGGGTGTTTCGAAACAGAGGCGCCCTCTATACAGCCCAGCAGCTCTCTGGACCAGGACCACAGGCTGATCCCACCCCCAGATTACCCTATCCCCGGTgctcctgtccccctccttctCACGGCTCTCGCCCCTCTGCCTGACGGCTCAGAACTGGTGTGCCAAATGCAACGTCTCCTTCCGCCTGACCTCAGACCTGGTGCAACAATGAGGTCCCACCACAAGAGGGCGGTGGACGCCACagagtcagggtctggggtgAAACAACAGCAGCAAGGGCGAGAGAGGAGAGGCTCAAGTCATGCATCTACGAGGTCTTCAGACAACGCCATCACCTTGCGGGACACTTGACCTCTCACACATGAGTTCAGTTCAATTAGTTATTATCATTGGTAAGATCTTGATATTTGAATGTGTCATCATATTGATGAAGATACTAATTGGAGAACTAAAACAAACGATGTTAATTATAATAATGTAAATTATCAAGACGATGACATTTTCTCAGAATTCTGTAAAATGTGTCATTTTTTGAATGCCATATATTTTTCCATTCTTTTACATCAAATGCTTGTGTTCCACACAAATTGCAATATTTGAGGTGTTATGACTTGATTGTAAGGTCAGTTGCGAACACTAGATGGTGCCAGAGAGCTATTTACAGGGACAGAAAAAAAACTCGCTTCAATTTTTCAATTTTATTTTGAAAGAAAAATATACCTATTATTTCATAAGAACTTCATATAGAGTACCCTGATAAGTaacacatgggggggggggggg

Function

NR:

description
PR domain zinc finger protein 8-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036936978.1 False 2569 mRNA 0.47 3 13592825 13595786
XM_021622692.2 True 2538 mRNA 0.47 3 13592830 13595786
Loading

Neighbor

gene id symbol gene type direction distance location
anxa3b anxa3 coding upstream 47697 13536864 ~ 13545128 (+)
mrrf mrrf coding upstream 80680 13496613 ~ 13512145 (+)
LOC110536991 morn5 coding upstream 153323 13428952 ~ 13439502 (+)
LOC110536984 strbp coding upstream 532940 12867389 ~ 13059885 (+)
dbh dbh coding upstream 1234351 12308661 ~ 12358474 (+)
LOC118937681 LOC106568394 coding downstream 35641 13631427 ~ 13637704 (+)
LOC110536790 LOC106568394 coding downstream 42165 13637951 ~ 13655818 (+)
LOC110537002 arl15 coding downstream 71488 13667274 ~ 13733044 (+)
LOC110536792 NA coding downstream 163174 13758960 ~ 13766157 (+)
LOC110537006 LOC106568401 coding downstream 329529 13925315 ~ 13930198 (+)
G1039618 NA non-coding upstream 20695 13571902 ~ 13572130 (+)
G1039616 NA non-coding upstream 21190 13571425 ~ 13571635 (+)
G1039600 NA non-coding upstream 66479 13526122 ~ 13526346 (+)
G1039592 NA non-coding upstream 75296 13517237 ~ 13517529 (+)
G1039557 NA non-coding upstream 119495 13472063 ~ 13473330 (+)
G1039630 NA non-coding downstream 11397 13607183 ~ 13607655 (+)
G1039631 NA non-coding downstream 12574 13608360 ~ 13611478 (+)
G1039647 NA non-coding downstream 48032 13643818 ~ 13701135 (+)
G1039674 NA non-coding downstream 114919 13710705 ~ 13711000 (+)
G1039676 NA non-coding downstream 116068 13711854 ~ 13712188 (+)
G1039430 LOC106568378 other upstream 309655 13282372 ~ 13283170 (+)
G1039147 NA other upstream 466658 13124924 ~ 13126167 (+)
LOC110536961 LOC106568434 other upstream 2019990 11568368 ~ 11602303 (+)
G1037472 NA other upstream 2137629 11452006 ~ 11455196 (+)
G1036562 LOC106568456 other upstream 2631702 10958408 ~ 10961123 (+)
G1040196 NA other downstream 569884 14165670 ~ 14169934 (+)
G1040578 NA other downstream 820895 14416681 ~ 14416991 (+)
G1041168 LOC106568367 other downstream 1300572 14896358 ~ 14903843 (+)
G1041432 NA other downstream 1749133 15344919 ~ 15362742 (+)
G1041494 LOC106568352 other downstream 1869017 15464803 ~ 15564470 (+)

Expression

LOC110536999 Expression in all Baseline Samples

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LOC110536999 Expression in each Bioproject

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LOC110536999 Expression in each Sample
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Co-expression Network