LOC110536792



Basic Information


Item Value
gene id LOC110536792
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 13758960 ~ 13766157 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_036936980.1
ATGTCTGAGGAAGGAGGAAGGGGTCCGAGGGACCTGATCAAGGTGACCCATGACAAGCTCTCTGTGGATGCAGTGTCACTCCTCACCAGCCCCTCCTGTGGTGCTATTTCCATCTTCATAGGGACGACAAGGAACAATTTTGAGGGGAAGAAGGTGGTGCAGTTGGAGTATGAAGCCTATGTCCCTATGGCCCAATCAGAACTCAGGAAGATCTACACAGACATCAGGGCAAGATGGCCCACTGTCAGGCACATGTGTCCATCATCGACTGGACTGGTGCCTGTGAATGAGGCCGGTGTGATCATCGGCATCTCATCTCCTCACAGAGGGAACGCCCTGGAGGCAGTGCAGTTCTGTATAGACACCCTGAAAGCCACCGTGTCCACATGGAAGAAGAAGGTGTATGAAGCTGACGAGTCCTGTTGGAAAGAGAACAAGGAGTGCCAGTGGACAGGACAGAGTTGAACTCTGACCTCATCTAGGAGCTTTTCTATGGCAAATATTAGATCACACACAGTACCAGTGAATCTAAAGCTGTCCCCAACAATACAGAAAATAAGTCATTCACACCTTTATGTACGTAAAGTTTTAATGAAATAAAATTCCCCATCAGCATATTTACAACACAAAATCAAAAGTTTCAATGAACACAATAACGTTGTCATAAAAAAAATGAATGCTCGAAAATCGTAATGAAGGAAGTGGTATGTACCCTTTGAAAATACACCTGGAAAAATATCAGTGCAAAAATATATCTCATAAACATTATCTCAGAGAGTTTAGTCTCTGCTACTGTCTGTATCCTACAATTAATTAGTTGCTGTTGTTTCTCTCAGTCATGATACAATGACTGTACAAAATAAACGGATTAACCAGTAAGTGCTTCTAATATTGCATTTTCACCAtagctatgtagggaataagttAAACACTTGTTTAAGTGTTATGTTTTATCTATTGATAATAAAATATTTGAATGATACATATTTAATATAGAAACCACACAATAAATATACTTATTTTCTACACATTCAATAACTCTGCTTTGATTAATGTcactacatttttacaaatggtACAATGAATCAAATGTTACATTAATCTGATCTGAATACAGTGTATATTGTAAAGACAGCATCTTCACAGTGTCTCCCAAGGCAGTTGTATGGCTGGGGTAATTATA

Function


NR:

description
molybdopterin synthase catalytic subunit-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_036936980.1 True 1183 mRNA 0.40 4 13758960 13766157
Loading

Neighbor


gene id symbol gene type direction distance location
LOC110537002 arl15 coding upstream 25916 13667274 ~ 13733044 (+)
LOC110536790 LOC106568394 coding upstream 103142 13637951 ~ 13655818 (+)
LOC118937681 LOC106568394 coding upstream 121256 13631427 ~ 13637704 (+)
LOC110536999 NA coding upstream 163174 13592825 ~ 13595786 (+)
anxa3b anxa3 coding upstream 213832 13536864 ~ 13545128 (+)
LOC110537006 LOC106568401 coding downstream 159158 13925315 ~ 13930198 (+)
LOC110537007 tcp4 coding downstream 167720 13933877 ~ 13949911 (+)
LOC100136685 LOC106568404 coding downstream 193772 13959929 ~ 13982026 (+)
LOC110536793 LOC106568406 coding downstream 249893 14016050 ~ 14071100 (+)
LOC118937929 NA coding downstream 253890 14020047 ~ 14020176 (+)
G1039693 NA non-coding upstream 6331 13752415 ~ 13752629 (+)
G1039691 LOC106568398 non-coding upstream 7848 13750888 ~ 13751112 (+)
G1039692 LOC106568398 non-coding upstream 8381 13750346 ~ 13750579 (+)
G1039655 NA non-coding upstream 10892 13733137 ~ 13748068 (+)
G1039685 NA non-coding upstream 32528 13725894 ~ 13726432 (+)
G1039720 NA non-coding downstream 32981 13799138 ~ 13799559 (+)
G1039721 NA non-coding downstream 33661 13799818 ~ 13800698 (+)
G1039730 NA non-coding downstream 45258 13811415 ~ 13812394 (+)
G1039746 NA non-coding downstream 107967 13874124 ~ 13910537 (+)
G1040013 NA non-coding downstream 144400 13910557 ~ 13910886 (+)
G1039430 LOC106568378 other upstream 475790 13282372 ~ 13283170 (+)
G1039147 NA other upstream 632793 13124924 ~ 13126167 (+)
LOC110536961 LOC106568434 other upstream 2186125 11568368 ~ 11602303 (+)
G1037472 NA other upstream 2303764 11452006 ~ 11455196 (+)
G1036562 LOC106568456 other upstream 2797837 10958408 ~ 10961123 (+)
G1040196 NA other downstream 399513 14165670 ~ 14169934 (+)
G1040578 NA other downstream 650524 14416681 ~ 14416991 (+)
G1041168 LOC106568367 other downstream 1130201 14896358 ~ 14903843 (+)
G1041432 NA other downstream 1578762 15344919 ~ 15362742 (+)
G1041494 LOC106568352 other downstream 1698646 15464803 ~ 15564470 (+)

Expression


LOC110536792 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 3.
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LOC110536792 Expression in each Bioproject

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LOC110536792 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 20.
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Co-expression Network