plpp1a (plpp1)


Basic Information

Item Value
gene id plpp1a
gene name plpp1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 14083339 ~ 14108194 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021622708.2
CGATAGTCTCTTCGGTCCATCCTCTTCGCCAGCTGCCATAACGAAACCCCACTGTGCTCATGGCTCTTTGCGCTGTCTGGTAGACTACAGAGTATACAGACCTCTCTACATTATAGCCTTCACCGTCGGCTCTGCCAACCGATTTTAAATTATACGCAAAGGACTGTCTAATTTACCGGGCCACGGTGATTAGAATTTCGATGCGCACGACGATTCCATGCGCACGATCATTCAAAGGGGAGGATCTGCTCTAACATTCTGTGTCAATTTACGGCATTTACGCTGTCTGTCGCCATTCTAAGGCTTCAAAGGTTAGGCTTCTCAATTGACGGTTTCTAATATTATTTTTAGGTCGAAGTATTGTTTAGGTTTAGTCTAATCAGATCTACGGTTACTTGGCTACTAAGCTTTCAAGGATACGACAACAACACGAGTGGTCTAAGGATCATCTGTGTCAACGAGCTGAGGAGAAACCGTAAAAATGTTCGAGACGAGAGGGATTCCTTTTATTCTGCTTGACATCGCCTGTCTAATTCTCGCGGGACTGCCCCTGGCAGCCCTTAAATTGGGCCAAATCAAGCCCTATCAGAGGGGCTTTTTCTGTAACGATGACAGCATCAGCTACCCCTTCCACCCCAGCACAGTCACCTCCAATGTGCTCTACGGTGTGGGCTTCACTTTGCCCATTTGCTCTATGGTCTTTGGAGAGTGCCTTTCGGTCTATCTCAAACGCATCAAATCAAAGTCCTCTTTCAGCAACATGTATGTGGCCCGTGTTTACAAAGCCATCGGCACATTCGTGTTCGGGGCAGCCATGAGCCAATCGCTCACTGACATCGCCAAGTATTCGATTGGCCGGCTCCGACCCCACTTCCTGGACGTGTGCAAGCCTGACTGGAAGCTGATCAACTGCACGGCAGGCACCTACATAGAGGACTTTACCTGCACAGGGGACGCACGCTTGGCCAATGAGGGCAGgctGTCTTTCTACTCTGGCCATTCCTCCTTCTCCATGTACTGCATGCTGTTCCTGGCACTGTACATCCAGGCCAGGCTGCAGGCAGGGTGGGCCAGACTCCTGAGACCAACCCTACAGTTCTTCCTGATCGCGGCGTCTGTGTACACCGGACTGTCTCGTGTGTCTGACTACAAACACCACTGGAGCGACGTCCTGGTTGGCCTTATCCAGGGAGTGCTCATGGCAACACTGGTAGTCTTCTTCGTGTCAGACTTCTTCAAGAAGAAGGTTGAGCCTCAGAAGGAGGATATTCCCCACACCACCCTGCAGGAGACACCCACAAACGGAAACCACTACGACAGCAGCCCCAACTAAACTATAAAGGAGAGGAACCATCCGGAACCATACATGGCGTGTAGCCAGTGGGGAAGTGTTTACTGCATGCGCATCATACCCCACTAAGGGACGGACCACTGGGGTGGACAGAAAGGCTTAAGtaccaaatggccccctattccctatatagcatagcctatagggctctggtcaaaagtactgtactatgtagggaaatagggtgccatttggagcgTTGCCAAACCTGTGAATGTAACCCTGCTTTGTGCATTTCTGACCTATGACCTGGAGCCTAGCTCCCTATTGGACATTGAGTCACACCCATGTTGCCTTGGCTGGACTGCTACTATCATAGCTTCCTTTGTATTATCGTTACTATCCCAAACAAGACTAATATAAAATGTATCTGCCAACAAGACTAGTagaatatatctgtacctgactatcccaacaagactaatataatatatctgtacctgactatcccaacaagactaatataatatatctgtacctgactatcccaacaagactagtataatata
>XM_021622709.2
CGATAGTCTCTTCGGTCCATCCTCTTCGCCAGCTGCCATAACGAAACCCCACTGTGCTCATGGCTCTTTGCGCTGTCTGGTAGACTACAGAGTATACAGACCTCTCTACATTATAGCCTTCACCGTCGGCTCTGCCAACCGATTTTAAATTATACGCAAAGGACTGTCTAATTTACCGGGCCACGGTGATTAGAATTTCGATGCGCACGACGATTCCATGCGCACGATCATTCAAAGGGGAGGATCTGCTCTAACATTCTGTGTCAATTTACGGCATTTACGCTGTCTGTCGCCATTCTAAGGCTTCAAAGGTTAGGCTTCTCAATTGACGGTTTCTAATATTATTTTTAGGTCGAAGTATTGTTTAGGTTTAGTCTAATCAGATCTACGGTTACTTGGCTACTAAGCTTTCAAGGATACGACAACAACACGAGTGGTCTAAGGATCATCTGTGTCAACGAGCTGAGGAGAAACCGTAAAAATGTTCGAGACGAGAGGGATTCCTTTTATTCTGCTTGACATCGCCTGTCTAATTCTCGCTGGACTCCCGTTCGCAATACTCACACCGCTACACAATCCCTTCAAACGGGGATTTTTCTGTAACGATGATTCGATCAAGTACCCTCTAAAAGAAGACACCATATCCTATGAGTTGTTAGGTGGAGTTATGATACCAGTCACAGTACTCACTATGGTCTTTGGAGAGTGCCTTTCGGTCTATCTCAAACGCATCAAATCAAAGTCCTCTTTCAGCAACATGTATGTGGCCCGTGTTTACAAAGCCATCGGCACATTCGTGTTCGGGGCAGCCATGAGCCAATCGCTCACTGACATCGCCAAGTATTCGATTGGCCGGCTCCGACCCCACTTCCTGGACGTGTGCAAGCCTGACTGGAAGCTGATCAACTGCACGGCAGGCACCTACATAGAGGACTTTACCTGCACAGGGGACGCACGCTTGGCCAATGAGGGCAGgctGTCTTTCTACTCTGGCCATTCCTCCTTCTCCATGTACTGCATGCTGTTCCTGGCACTGTACATCCAGGCCAGGCTGCAGGCAGGGTGGGCCAGACTCCTGAGACCAACCCTACAGTTCTTCCTGATCGCGGCGTCTGTGTACACCGGACTGTCTCGTGTGTCTGACTACAAACACCACTGGAGCGACGTCCTGGTTGGCCTTATCCAGGGAGTGCTCATGGCAACACTGGTAGTCTTCTTCGTGTCAGACTTCTTCAAGAAGAAGGTTGAGCCTCAGAAGGAGGATATTCCCCACACCACCCTGCAGGAGACACCCACAAACGGAAACCACTACGACAGCAGCCCCAACTAAACTATAAAGGAGAGGAACCATCCGGAACCATACATGGCGTGTAGCCAGTGGGGAAGTGTTTACTGCATGCGCATCATACCCCACTAAGGGACGGACCACTGGGGTGGACAGAAAGGCTTAAGtaccaaatggccccctattccctatatagcatagcctatagggctctggtcaaaagtactgtactatgtagggaaatagggtgccatttggagcgTTGCCAAACCTGTGAATGTAACCCTGCTTTGTGCATTTCTGACCTATGACCTGGAGCCTAGCTCCCTATTGGACATTGAGTCACACCCATGTTGCCTTGGCTGGACTGCTACTATCATAGCTTCCTTTGTATTATCGTTACTATCCCAAACAAGACTAATATAAAATGTATCTGCCAACAAGACTAGTagaatatatctgtacctgactatcccaacaagactaatataatatatctgtacctgactatcccaacaagactaatataatatatctgtacctgactatcccaacaagactagtataatata

Function

symbol description
plpp1 Enables ceramide-1-phosphate phosphatase activity; phosphatidate phosphatase activity; and sphingosine-1-phosphate phosphatase activity. Involved in several processes, including phospholipid dephosphorylation; phospholipid metabolic process; and sphingolipid metabolic process. Located in apical plasma membrane and membrane raft. Is integral component of plasma membrane.

NR:

description
phospholipid phosphatase 1 isoform X2

GO: NA

KEGG:

id description
K01080 PLPP1_2_3; phosphatidate phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021622708.2 False 1860 mRNA 0.48 6 14083339 14108194
XM_021622709.2 True 1857 mRNA 0.48 6 14083339 14108194

Neighbor

gene id symbol gene type direction distance location
dhx29 dhx29 coding downstream 66786 13991357 ~ 14016553 (-)
LOC110537005 LOC106568400 coding downstream 196204 13811384 ~ 13887135 (-)
LOC110537004 LOC106568399 coding downstream 276435 13766381 ~ 13806904 (-)
LOC110537003 LOC106568398 coding downstream 326649 13733254 ~ 13756690 (-)
LOC110537001 LOC106568395 coding downstream 416584 13661468 ~ 13666755 (-)
LOC110537010 LOC106568408 coding upstream 11959 14120153 ~ 14155328 (-)
LOC110537014 LOC106568411 coding upstream 72209 14180403 ~ 14198027 (-)
zmp:0000001301 LOC106568410 coding upstream 89964 14198158 ~ 14213576 (-)
tdgf1 LOC106568419 coding upstream 141716 14249910 ~ 14252948 (-)
LOC110537020 LOC106568373 coding upstream 721427 14829621 ~ 14831545 (-)
G1040292 NA non-coding downstream 4650 14070953 ~ 14078689 (-)
G1040283 NA non-coding downstream 59874 14023034 ~ 14023465 (-)
G1040282 NA non-coding downstream 60673 14021555 ~ 14022666 (-)
G1040094 NA non-coding downstream 96926 13986092 ~ 13986413 (-)
G1040090 NA non-coding downstream 99537 13983506 ~ 13983802 (-)
G1040383 NA non-coding upstream 103901 14212095 ~ 14242009 (-)
G1040424 NA non-coding upstream 183740 14291934 ~ 14292138 (-)
G1040442 NA non-coding upstream 210167 14318361 ~ 14318603 (-)
G1040479 NA non-coding upstream 233362 14341556 ~ 14341809 (-)
G1040494 NA non-coding upstream 256297 14364491 ~ 14364840 (-)
G1039504 NA other downstream 727544 13355300 ~ 13355795 (-)
LOC110536986 LOC106568381 other downstream 760623 13321118 ~ 13324415 (-)
G1039364 NA other downstream 906896 13147658 ~ 13176443 (-)
G1039366 NA other downstream 931032 13151021 ~ 13152307 (-)
G1038943 NA other downstream 1362185 12720501 ~ 12721154 (-)
G1040300 NA other upstream 70464 14178658 ~ 14180141 (-)
G1040432 LOC106568413 other upstream 199406 14307600 ~ 14311052 (-)
G1042500 NA other upstream 1995969 16104163 ~ 16104883 (-)
LOC110537059 LOC106568318 other upstream 2216769 16324956 ~ 16328168 (-)
LOC110537061 LOC106568319 other upstream 2425423 16417638 ~ 16549073 (-)

Expression


Co-expression Network