Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110537020 |
| gene name | LOC106568373 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 14829621 ~ 14831545 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| C3a anaphylatoxin chemotactic receptor-like |
| id | name | namespace |
|---|---|---|
| GO:0007165 | signal transduction | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0004930 | G protein-coupled receptor activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021622729.2 | True | 1535 | mRNA | 0.46 | 2 | 14829621 | 14831545 |
14,828,000
14,828,400
14,828,800
14,829,200
14,829,600
14,830,000
14,830,400
14,830,800
14,831,200
14,831,600
14,832,000
14,832,400
14,832,800
14,833,200
14,833,600
14,834,000
14,834,400
14,834,800
14,835,200
14,835,600
NC_048576.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tdgf1 | LOC106568419 | coding | downstream | 576673 | 14249910 ~ 14252948 (-) |
| zmp:0000001301 | LOC106568410 | coding | downstream | 616045 | 14198158 ~ 14213576 (-) |
| LOC110537014 | LOC106568411 | coding | downstream | 631594 | 14180403 ~ 14198027 (-) |
| LOC110537010 | LOC106568408 | coding | downstream | 674293 | 14120153 ~ 14155328 (-) |
| plpp1a | plpp1 | coding | downstream | 721427 | 14083339 ~ 14108194 (-) |
| c3ar1 | c3ar1 | coding | upstream | 38194 | 14869739 ~ 14875572 (-) |
| LOC110537021 | LOC106568367 | coding | upstream | 64803 | 14896348 ~ 14946975 (-) |
| LOC110537023 | NA | coding | upstream | 238527 | 15070072 ~ 15075473 (-) |
| LOC110537026 | LOC106568365 | coding | upstream | 254372 | 15085917 ~ 15096696 (-) |
| LOC110537025 | dab2 | coding | upstream | 267999 | 15099544 ~ 15114328 (-) |
| G1041049 | NA | non-coding | downstream | 35433 | 14793947 ~ 14794188 (-) |
| G1041048 | NA | non-coding | downstream | 37584 | 14791828 ~ 14792037 (-) |
| G1040975 | NA | non-coding | downstream | 156677 | 14670057 ~ 14672944 (-) |
| G1040863 | NA | non-coding | downstream | 315033 | 14491274 ~ 14514588 (-) |
| G1040597 | NA | non-coding | downstream | 397688 | 14431720 ~ 14431933 (-) |
| G1041131 | NA | non-coding | upstream | 24507 | 14856052 ~ 14856278 (-) |
| G1041132 | NA | non-coding | upstream | 25126 | 14856671 ~ 14856898 (-) |
| G1041138 | NA | non-coding | upstream | 29072 | 14860617 ~ 14861126 (-) |
| G1041831 | NA | non-coding | upstream | 45699 | 14877244 ~ 14877536 (-) |
| G1041859 | NA | non-coding | upstream | 108247 | 14939792 ~ 14941546 (-) |
| G1040432 | LOC106568413 | other | downstream | 518569 | 14307600 ~ 14311052 (-) |
| G1040300 | NA | other | downstream | 649480 | 14178658 ~ 14180141 (-) |
| G1039504 | NA | other | downstream | 1473826 | 13355300 ~ 13355795 (-) |
| LOC110536986 | LOC106568381 | other | downstream | 1506905 | 13321118 ~ 13324415 (-) |
| G1039364 | NA | other | downstream | 1653178 | 13147658 ~ 13176443 (-) |
| G1042500 | NA | other | upstream | 1272618 | 16104163 ~ 16104883 (-) |
| LOC110537059 | LOC106568318 | other | upstream | 1493418 | 16324956 ~ 16328168 (-) |
| LOC110537061 | LOC106568319 | other | upstream | 1702072 | 16417638 ~ 16549073 (-) |
| LOC110537077 | LOC106568284 | other | upstream | 2233776 | 17065241 ~ 17068020 (-) |
| G1044482 | NA | other | upstream | 2864584 | 17696129 ~ 17697105 (-) |
