LOC110537028 (LOC106568361)


Basic Information

Item Value
gene id LOC110537028
gene name LOC106568361
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 15152009 ~ 15154387 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021622743.2
AACAATGTAACAAATCACAACAACTAATTTGACCAATAAGGCAAGGAGGTTTTAGTCAACCGACGCAGATGAACGAGAGAGTCATTCCACAGTCTTCAATGGGGCGAATCGTTCATCGCATTCCTCATGCCTTTACATAATTGTATAGCTAAAGAAGACACCGAATGGCATGCTAGTTGCGCAGATAGCCTAGGCTACATCATAAAACTTTTCCTGGAACGGAGTTTGCCTTTCTGAACGTTAAAACGACGACGGAACTGTTTTTTTCTACTTCATCTTGTCTGTGCGGCAAAGCAATGGAACGCAGAAGTTGAATAATTCAGTATTGTGAAGCCTCTACTGCTGTGAAGATAAGTGGAGAGTGCCTGTGAACTTGTATTGTAACAGTGTATCAAACCTCGGGGAAAAATTCAAATGAACAAATTGCAGGCCATGTGCGGTTTTCACACGGTATCACTGCATTGCACATTATTTGGTGAACCTCGTTCATTCCCCACTGGCGCGTACTGAATGGGAGGGAATGGATTTGGATGACTTCTTTTTGACATATTTGATGAATATACTGATAACCAAATCCACATGTTGAAGTCTTTTGTTTATTCGGATCAGTCTACTTCGAAATGGCAAGTTTTGCCGGGTTTATAAAGTGGACTGGGAGACCGACTTTGTATTTATGCTGTGCGTTTGCCCTGTTCGGTTGTCTTTGCATCGCGTCCCCTACTCATGGTCGTCGGCTCATCTGTTGGCAAGCCATTATGAAGTGTCATGGAGAGCCGGATTGTCACTACGCATATGACCAATACCTTTACGCCTGTGCGCCTGTTATCAACGGGGATAGGAAGAAGTGTCCCAGCCACTGCATCTCGTCCCTTATCCAGCTGAATCTAACTGAGACCGGTCCGTCTCTAGAGGACTGTGACTGCGCCTCGGACCCCGTCTGCCGGAGCACCAAACGCGCCATAGAGCCGTGCCTGCCTCGGACAAGCAACATGGGCTGCACCGAAGCCCGGCGGGAGTGCGAGAGCGATTACCAATGTAGCTCGGCAATGCGTGACTATTTGTTTCACTGCCGTAAACTTTTCGGAGGCGAGAGATGTTCGGACGATTGCAGGAGGGTGATAGCCAACATGCGCAATATGCCCAAAGCACAACAACTTGATACTTGTGTTTGTGATGGCACGGAGAGAACGATATGCGAGTACGTCAAAGTTAGTATGAAAAACTTTTGCTTTGACTCTATGGACAGATACGCAGGCAGCGGGTTTTCTGATTCGGACTCTGAAGATGATTATGATGATATGGAGGATTATGTCTATGTGGAAAACGCTAGTGATTCACTTAAATCCTCCTGTCGGGATGTATGGACTTCTACTGTGGCCACCATTTTGGTTCTAATGCGTCTTATCTGATAGGGCAGTCTACCCAAGTTGATTCAGCTGTTGGGGAAGTTGTTAGAGAAATAGAGAGGCCTGTGAAAcgttgacagagagacagaatagcTCATGAAAGTGTTGTAACAACAGCACACCTGCTTTAGCGTATACTTTGTGTGTTTGGAAGATTTATTGGCCTTTGCTCTGCTGTCTTCATAATGGGGCTTCTCAACATTCTATCTGGTCTCAGTCTCTGTGCTGATAGGCTATGGGTCATCTTGCTCACAAATGTTTATAtttaaaatgtatacattttatgTGAATCTCAAAAGTTTATAGATTCATTTCCAGATAGCTGTGCACCTCTAAAATATGTAATTGTTTTAACCAAACCTTAAAGAATGTTCTAGGCCTACTATAAGCTTCTCCTTACCTTGTGTCTCACAAAATAGCCCAAAAAGTTTGACACACAATTTTCTTTAATGTGGACAGCCAGGTGACTTGTAAGTGTACATATGTATAATGCTGTTTCAAGACAATAGTGAAAACATCAGTATAAAACATGTTCTTGGTCACTTGGTGAAAATGGGGACAGACTAATCAAGTTTTCTTTCACTATGAGCTAGACAATAGATATAGGCCTACATTTCATTAAGATGCCATTTAAGCTCTAGTCAGTTGGTAATCATCTAAGTGACAGATGTAAAATGCATTTACCTAACCACAGTTTGATTTGTTATTTAATATTATTAGCCTTAATCATGTCCCAGACATTTCCATAAGCTCAGTATCAATATCAAGTTAAAAAACAAGTTAAGGGAGATTATTTTTATATGTCAAAATGTGTGAAGTTAAattgtacagtatattgtatgatatggattttttttcccaGAGTTATTTGTTTATTACTGCTAAGGATTTTTGCACTGTATAGAAATGTCATGAAATGCTTCACTGTCTACATTGTATTTTAGTGAAAATATAAATGTTCTTGCTTAAAATT

Function

NR:

description
growth arrest-specific protein 1-like

GO: NA

KEGG:

id description
K06232 GAS1; growth arrest-specific 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021622743.2 True 2379 mRNA 0.41 1 15152009 15154387

Neighbor

gene id symbol gene type direction distance location
LOC110537025 dab2 coding downstream 37681 15099544 ~ 15114328 (-)
LOC110537026 LOC106568365 coding downstream 55313 15085917 ~ 15096696 (-)
LOC110537023 NA coding downstream 76536 15070072 ~ 15075473 (-)
LOC110537021 LOC106568367 coding downstream 205034 14896348 ~ 14946975 (-)
c3ar1 c3ar1 coding downstream 276437 14869739 ~ 14875572 (-)
LOC110536797 LOC107675342 coding upstream 183132 15337519 ~ 15339341 (-)
LOC110537035 LOC106568356 coding upstream 190533 15344920 ~ 15362787 (-)
LOC110537036 LOC106568354 coding upstream 210299 15364686 ~ 15381943 (-)
LOC110537037 LOC106568353 coding upstream 254604 15408991 ~ 15449896 (-)
prune2 LOC106568351 coding upstream 424688 15579075 ~ 15596603 (-)
G1041932 LOC100136130 non-coding downstream 13298 15053224 ~ 15138711 (-)
G1041934 NA non-coding downstream 72715 15076403 ~ 15079294 (-)
G1041895 NA non-coding downstream 113361 14992760 ~ 15038648 (-)
G1041871 NA non-coding downstream 198023 14953749 ~ 14953986 (-)
G1041979 NA non-coding upstream 24178 15178565 ~ 15313769 (-)
G1042016 NA non-coding upstream 71334 15225721 ~ 15268296 (-)
G1042069 NA non-coding upstream 162485 15316872 ~ 15317081 (-)
G1042072 NA non-coding upstream 168384 15322771 ~ 15323060 (-)
G1042074 LOC100135965 non-coding upstream 169624 15324011 ~ 15328086 (-)
G1040432 LOC106568413 other downstream 840957 14307600 ~ 14311052 (-)
G1040300 NA other downstream 971868 14178658 ~ 14180141 (-)
G1039504 NA other downstream 1796214 13355300 ~ 13355795 (-)
LOC110536986 LOC106568381 other downstream 1829293 13321118 ~ 13324415 (-)
G1039366 NA other downstream 1999702 13151021 ~ 13152307 (-)
G1042500 NA other upstream 949776 16104163 ~ 16104883 (-)
LOC110537059 LOC106568318 other upstream 1170576 16324956 ~ 16328168 (-)
LOC110537061 LOC106568319 other upstream 1379230 16417638 ~ 16549073 (-)
LOC110537077 LOC106568284 other upstream 1910934 17065241 ~ 17068020 (-)
G1044482 NA other upstream 2541742 17696129 ~ 17697105 (-)

Expression


Co-expression Network