LOC110537041 (LOC106568348)


Basic Information

Item Value
gene id LOC110537041
gene name LOC106568348
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 15614458 ~ 15644688 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021622756.2
CCCCGTTCATGGGCCCATACTTTTTATGTTGGTGAAAATTATTAAGATGTAGAATAATGACGAAGAGAAAAACGTAAATAAAGGCAAGGATGAGTGATGTTGAAGAAGAATGACAAAAGGGTGGATGAATATGAAGAAAATGTTTTACTGTGTAGAGCACTTTTATTTTTATGGCTCCTTGCCTTTTTGCTGCTAGGTTCACATAGGGTCCAGTCAGAGTACACTGTATTCTGTACCTAATGAAATTACAGATGGGACAAGCAAAGGGGACAATAGAAAAAATATAACAACGTTAAGCAATGCAACTTCAATGAAGACAAATTCAAAAGGAACATATTGTGGTATGGGATTATTTTTTGTTACTCCTGTGGAATAATGGAATTtcgttttttatacatttatggTGATATGGAGTAAAAGTCCGCCATATTCATTCACCACACCCGGAGTTCAACTATTGGAGGCCTACCTCCTCGACCCCAAAAGTAAGTGTTATCAAGAGAGTCATGACTCTGGGCTCCGTAGGGGCCTGTTGCCTCAGCGAAGAGGGAAAGGAGGCTCGACGGATCAACGACGAGATCGAAAGACAGCTTCGCCGGGACAAGAAAGACTCGCGCCGCGAGTTTAAGCTGTTGCTTCTCGGGACTGGTGAGAGTGGGAAGAGCACCTTCATCAAGCAGATGAGGATCATCCATGGGACGGGCTACTCCGAGGATGACAAGCGAGGCTTCACCAAGCTGGTGTACCAGAACATCTTCACTGCCATGCAGTCCATGATCCATGCTATGGAGACCCTTCAGATCCCTTACAAGTGTGAAGACAACCAGGGCCATGCAAATATTGTCATTGAAGTGGACGTAGAGAAGGTCACAATGTTTACAAATCCGTACGTTGACGCCATTAAGAGTCTATGGAATGACCCAGGGATCCAGGAATGCTACGATCGGAAGAGGGAATACCAGCTCTCAGACTCTGCCAAATACTACTTGAATGCACTGGACCGTATAGCTGAGTCATCTTATGTCCCGACCCAGCAAGACGTGCTCAGGGTCAGGGTCCCTACCACAGGCATCATAGAGTACCCCTTTGACCTCCAGAGTGTGGTCTTCAGAATGGTGGATGTGGGTGGCCAGAGGTCTGAGAGGCGGAAATGGATCCACTGCTTTGAGAATGTCACCTCCATCATGTTCCTGGTGGCTCTCAGTGAATACGACCAGGTCCTGGTAGAATCTGACAATGAGAATCGAATGGAGGAAAGCAAAGCGTTGTTCAGGACAATAATAACCTACCCGTGGTTTAAAGATTCCTCAATCATTCTATTCTTGAATAAGATTGACTTAATGCAGGAGAAAATCTTGTTCTCACATCTGGTGGATTACTTCCCTGAATATGATGGGCCCCAGCGGGACCCACAGGCAGGAAGAGAATTCATCTTGAAGATGTTTGTGGACCTGAATCCAGATTGCGATAAAATCTACTCCCACTTCACCTGTGCCACTGACACGGAGAACATTCGATTTGTCTTTGCCGCTGTCAAGGACTTCATTCTGCAGCTGAATCTGAAGGAGTACAACCTGGTTTAAAGGCTACAGCTGAATCTGAAGGAGTACAACCTGATTTAAAGGCTCCAGCTGAATCTGAAGTAGTACAACCTGGTTTAAAGGCTCCAGCTGAATCTGAAGTAGTACAACCTGGTTTAAAGGCTCCAGCTGAATCTGAAGTAGTACAACTTGGATTAAAGAATCCAGCTGAATTTTACGGAGTACAACCTGGTTTAAAGGCTCCAGCTGAATCTGAAGTAGTACAACTTGGATTAAAGAATCCAGCTGAATTTTACGGAGTACAACCTGGTTTAAAGACTCCAGCCGACCGCAGTTACAGACTCTTTAATACCATGTGAAGGAGTACAACCTGGTTTAAAGATTCCAGCCCACCGCAGTTACAGACTCCAAAAGCTGCAGCCAGAGACCAGGGCCTGGAGCCATAGTACAGATAGACTACTTCAGTATGTCTGGTTGTCTTTCACTACGGTGAAACCCTACAGAGAATTTACATAAATGACTGTATTATTTCAACTGTTCACCActgcattattttattttttatgggTATCTTTGATTTTGTTTACGAGGTGCATCATGATGATGAATATCACTGTGCCTTTTTGAGGATAGAGGATTCTGGTGTACATTGAGAGTTATTGAGAACTCTTTGTAAACCGTTTAAAACACATTATAACAGTGTAAACACACATTTCATCAGATGAGAGTTAAAAAGTGCTTTGATGTGCCTGGTGTGTCTCTGAGGACTGTTGACCGACGGCTCTCTTGTCAAAGAAAGTCTGGTGGACATTTAGATAACTGCTATGAATCACATCACATTACATCCTCCAGCGGGTCATAGTCACACTAGTGTTTCACCTATATGCATTTAGCAGGGGTGCACTGCCACTACATAAAAAAATGTAGATGTATGCCCTCCCCACCTCCCGCAGAAGGACCCCATGAAGGCCCCAAACACTGCAGTCtataatgtgttttttttgtattgAGACGTGgtttaaatacattgtttacGTATTTAAAATGAGTAGTCATTCTCTGGGTCAGAGGATAGAAGAAACAGTCATAATCATCACCTAGAACACGTAAACTAGCAAACAGGTATTATTTGCACAAttgacacattttgttgtttttctattggTGTATAGCTAAGTGTTGCCAAATTAATATTACCTCTATTGACTGAACACCCTCTACACCCTCTAAAGGGTGAAATCTGACACTGTACCATCAAATTTCAGCCAAAACGCATTTGACTCAACACTTTTCAGTTGTGATACTGTATATGTCAGCTACCAGTGTTATAAAATAAGCATATTAGCTCCCACTAAACAGTGCATCTTGATGCTGTTCCTCATCCAATGAGGGATTGTTATCATATTTACACAAGGTCTATCGTTGATCCATAACATCTGCCTTTTGACAGTCCTTTGTTTTCTCAGTGGAGATCTACTGTATTGCTTTGGCACAGTTTCAGTTTAGGGATTTTAAACTTTAATGAGTTATCGAATCACTCTCTGGTTTCAAGATTATTTCTGATAAGGGCTGAAAATGATTCCCCATATGTAGTATATGCCTCCTTGCACTTTGTAAATACAAACTGATACAGTGATTTTCTGTTTTAAGGTCCTGTAAAATGAAAAGTGTTGCAATTGTTACCTGCTGAATGAGAATGTTGGGTCCAATGACCTGCTTTGTACACAGGCATTCATTTCTTGAACTCATTTTTTGAATCATAAATATGTAATTTGAGAGTAAAAATAAGAACTTACATTTTTATATAAATTAAAGAACTAATCAAGGTTTTCAATTTGTGTCAATCTTCACACACCCTGACGTCATGTGCCATTTTAAAGTCTCGATTGAAAATAAAGCATATATATTTCACATTTATGTCAAATTATCTTCGGAGCAATTTTGTCCATGTTTTGAAATTAGGAGTGACGGAATAAATCATTACAATTAATGCAA
>XM_021622757.2
CACACCCCGTTCATGGGCCCATACTTTTTATGTTGGTGAAAATTATTAAGATGTAGAATAATGACGAAGAGAAAAACGTAAATAAAGGCAAGGATGAGTGATGTTGAAGAAGAATGACAAAAGGGTGGATGAATATGAAGAAAATGTTTTACTGTGTAGAGCACTTTTATTTTTATGGCTCCTTGCCTTTTTGCTGCTAGGTTCACATAGGGTCCAGTCAGAGTACACTGTATTCTGTACCTAATGAAATTACAGATGGGACAAGCAAAGGGGACAATAGAAAAAATATAACAACGTTAAGCAATGCAACTTCAATGAAGACAAATTCAAAAGGAACATATTGTGGTATGGGATTATTTTTTGTTACTCCTGTGGAATAATGGAATTtcgttttttatacatttatggTGATATGGAGTAAAAGTCCGCCATATTCATTCACCACACCCGGAGTTCAACTATTGGAGGCCTACCTCCTCGACCCCAAAAGTAAGTGTTATCAAGAGAGTCATGACTCTGGGCTCCGTAGGGGCCTGTTGCCTCAGCGAAGAGGGAAAGGAGGCTCGACGGATCAACGACGAGATCGAAAGACAGCTTCGCCGGGACAAGAAAGACTCGCGCCGCGAGTTTAAGCTGTTGCTTCTCGGGACTGGTGAGAGTGGGAAGAGCACCTTCATCAAGCAGATGAGGATCATCCATGGGACGGGCTACTCCGAGGATGACAAGCGAGGCTTCACCAAGCTGGTGTACCAGAACATCTTCACTGCCATGCAGTCCATGATCCATGCTATGGAGACCCTTCAGATCCCTTACAAGTGTGAAGACAACCAGGGCCATGCAAATATTGTCATTGAAGTGGACGTAGAGAAGGTCACAATGTTTACAAATCCGTACGTTGACGCCATTAAGAGTCTATGGAATGACCCAGGGATCCAGGAATGCTACGATCGGAAGAGGGAATACCAGCTCTCAGACTCTGCCAAATACTACTTGAATGCACTGGACCGTATAGCTGAGTCATCTTATGTCCCGACCCAGCAAGACGTGCTCAGGGTCAGGGTCCCTACCACAGGCATCATAGAGTACCCCTTTGACCTCCAGAGTGTGGTCTTCAGAATGGTGGATGTGGGTGGCCAGAGGTCTGAGAGGCGGAAATGGATCCACTGCTTTGAGAATGTCACCTCCATCATGTTCCTGGTGGCTCTCAGTGAATACGACCAGGTCCTGGTAGAATCTGACAATGAGGGCCCCAGCGGGACCCACAGGCAGGAAGAGAATTCATCTTGAAGATGTTTGTGGACCTGAATCCAGATTGCGATAAAATCTACTCCCACTTCACCTGTGCCACTGACACGGAGAACATTCGATTTGTCTTTGCCGCTGTCAAGGACTTCATTCTGCAGCTGAATCTGAAGGAGTACAACCTGGTTTAAAGGCTACAGCTGAATCTGAAGGAGTACAACCTGATTTAAAGGCTCCAGCTGAATCTGAAGTAGTACAACCTGGTTTAAAGGCTCCAGCTGAATCTGAAGTAGTACAACCTGGTTTAAAGGCTCCAGCTGAATCTGAAGTAGTACAACTTGGATTAAAGAATCCAGCTGAATTTTACGGAGTACAACCTGGTTTAAAGGCTCCAGCTGAATCTGAAGTAGTACAACTTGGATTAAAGAATCCAGCTGAATTTTACGGAGTACAACCTGGTTTAAAGACTCCAGCCGACCGCAGTTACAGACTCTTTAATACCATGTGAAGGAGTACAACCTGGTTTAAAGATTCCAGCCCACCGCAGTTACAGACTCCAAAAGCTGCAGCCAGAGACCAGGGCCTGGAGCCATAGTACAGATAGACTACTTCAGTATGTCTGGTTGTCTTTCACTACGGTGAAACCCTACAGAGAATTTACATAAATGACTGTATTATTTCAACTGTTCACCActgcattattttattttttatgggTATCTTTGATTTTGTTTACGAGGTGCATCATGATGATGAATATCACTGTGCCTTTTTGAGGATAGAGGATTCTGGTGTACATTGAGAGTTATTGAGAACTCTTTGTAAACCGTTTAAAACACATTATAACAGTGTAAACACACATTTCATCAGATGAGAGTTAAAAAGTGCTTTGATGTGCCTGGTGTGTCTCTGAGGACTGTTGACCGACGGCTCTCTTGTCAAAGAAAGTCTGGTGGACATTTAGATAACTGCTATGAATCACATCACATTACATCCTCCAGCGGGTCATAGTCACACTAGTGTTTCACCTATATGCATTTAGCAGGGGTGCACTGCCACTACATAAAAAAATGTAGATGTATGCCCTCCCCACCTCCCGCAGAAGGACCCCATGAAGGCCCCAAACACTGCAGTCtataatgtgttttttttgtattgAGACGTGgtttaaatacattgtttacGTATTTAAAATGAGTAGTCATTCTCTGGGTCAGAGGATAGAAGAAACAGTCATAATCATCACCTAGAACACGTAAACTAGCAAACAGGTATTATTTGCACAAttgacacattttgttgtttttctattggTGTATAGCTAAGTGTTGCCAAATTAATATTACCTCTATTGACTGAACACCCTCTACACCCTCTAAAGGGTGAAATCTGACACTGTACCATCAAATTTCAGCCAAAACGCATTTGACTCAACACTTTTCAGTTGTGATACTGTATATGTCAGCTACCAGTGTTATAAAATAAGCATATTAGCTCCCACTAAACAGTGCATCTTGATGCTGTTCCTCATCCAATGAGGGATTGTTATCATATTTACACAAGGTCTATCGTTGATCCATAACATCTGCCTTTTGACAGTCCTTTGTTTTCTCAGTGGAGATCTACTGTATTGCTTTGGCACAGTTTCAGTTTAGGGATTTTAAACTTTAATGAGTTATCGAATCACTCTCTGGTTTCAAGATTATTTCTGATAAGGGCTGAAAATGATTCCCCATATGTAGTATATGCCTCCTTGCACTTTGTAAATACAAACTGATACAGTGATTTTCTGTTTTAAGGTCCTGTAAAATGAAAAGTGTTGCAATTGTTACCTGCTGAATGAGAATGTTGGGTCCAATGACCTGCTTTGTACACAGGCATTCATTTCTTGAACTCATTTTTTGAATCATAAATATGTAATTTGAGAGTAAAAATAAGAACTTACATTTTTATATAAATTAAAGAACTAATCAAGGTTTTCAATTTGTGTCAATCTTCACACACCCTGACGTCATGTGCCATTTTAAAGTCTCGATTGAAAATAAAGCATATATATTTCACATTTATGTCAAATTATCTTCGGAGCAATTTTGTCCATGTTTTGAAATTAGGAGTGACGGAATAAATCATTACAATTAATGCAA

Function

NR:

description
guanine nucleotide-binding protein subunit alpha-11-like isoform X2

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0006184 obsolete GTP catabolic process biological_process
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function
GO:0004871 obsolete signal transducer activity molecular_function
GO:0031683 G-protein beta/gamma-subunit complex binding molecular_function
GO:0001664 G protein-coupled receptor binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021622756.2 False 3536 mRNA 0.41 8 15614458 15644684
XM_021622757.2 True 3386 mRNA 0.41 7 15614458 15644688

Neighbor

gene id symbol gene type direction distance location
LOC110537042 LOC106568350 coding downstream 2995 15599650 ~ 15611463 (-)
prune2 LOC106568351 coding downstream 17855 15579075 ~ 15596603 (-)
LOC110537037 LOC106568353 coding downstream 164562 15408991 ~ 15449896 (-)
LOC110537036 LOC106568354 coding downstream 232515 15364686 ~ 15381943 (-)
LOC110537035 LOC106568356 coding downstream 251671 15344920 ~ 15362787 (-)
LOC110536798 LOC106568347 coding upstream 2172 15646860 ~ 15658960 (-)
LOC110537046 NA coding upstream 40575 15685263 ~ 15706397 (-)
LOC110537047 LOC106568344 coding upstream 63879 15708567 ~ 15718973 (-)
LOC110537048 LOC106568343 coding upstream 78169 15722857 ~ 15757869 (-)
LOC110539118 NA coding upstream 115576 15760264 ~ 15771751 (-)
G1042179 NA non-coding downstream 70461 15511196 ~ 15543997 (-)
G1042175 NA non-coding downstream 109589 15504369 ~ 15504869 (-)
G1042150 NA non-coding downstream 116506 15497500 ~ 15497952 (-)
G1042121 NA non-coding downstream 171296 15442857 ~ 15443162 (-)
G1042116 NA non-coding downstream 178419 15435545 ~ 15436039 (-)
G1042167 NA non-coding upstream 200033 15844721 ~ 15865647 (-)
G1042386 NA non-coding upstream 331165 15975853 ~ 16004742 (-)
G1042409 NA non-coding upstream 345222 15989910 ~ 15994023 (-)
G1042425 NA non-coding upstream 367539 16012227 ~ 16012762 (-)
G1042426 NA non-coding upstream 368719 16013407 ~ 16013704 (-)
G1040432 LOC106568413 other downstream 1303406 14307600 ~ 14311052 (-)
G1040300 NA other downstream 1434317 14178658 ~ 14180141 (-)
G1039504 NA other downstream 2258663 13355300 ~ 13355795 (-)
LOC110536986 LOC106568381 other downstream 2291742 13321118 ~ 13324415 (-)
G1039366 NA other downstream 2462151 13151021 ~ 13152307 (-)
G1042500 NA other upstream 459475 16104163 ~ 16104883 (-)
LOC110537059 LOC106568318 other upstream 680275 16324956 ~ 16328168 (-)
LOC110537061 LOC106568319 other upstream 888929 16417638 ~ 16549073 (-)
LOC110537077 LOC106568284 other upstream 1420633 17065241 ~ 17068020 (-)
G1044482 NA other upstream 2051441 17696129 ~ 17697105 (-)

Expression

LOC110537041(LOC106568348) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 15.
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LOC110537041(LOC106568348) Expression in each Bioproject

Bar chart with 21 bars.
LOC110537041(LOC106568348) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 600.
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Co-expression Network