LOC110537083 (elovl2)


Basic Information

Item Value
gene id LOC110537083
gene name elovl2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 17179487 ~ 17180486 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110537083
AGGGACCCGTCAGCCAAGGCTACGCATCTTCCAGGGGTCAGAAATTGAGACTTTTAATTATAAACTAAACATGTACATAGACTCATGGATGGGTCCCAGAGATGAGCGGGTACAGGGATGGCTGCTTCTGGACAACTACCCTCCAACCTTTGCACTAACAGTCATGTACCTGCTGATCGTATGGATGGGGCCCAAGTACATGAGACACAGACAGCCGGTGTCTTGCCGGGGTCTCCTCTTGGTCTACAATCTGGGCCTCACGATCTTGTCCTTCTATATGTTCTATGAGATGGTGTCTGCTGTGTGGCACGGGGATTATAACTTATTTTGCCAAGACACACACAGTGCAGGAGAAACCGATACCAAGATCATAAATGTGCTGTGGTGGTACTACTTCTCCAAGCTCATAGAGTTTATGGATACCTTCTTCTACATCCTACGGAAGAACAACCATCAGATCActtttctgcacatctaccaccaTGCTAGCATGCTCAACATCTGGTGGTTCGTCATGAACTGGGTGCCCTGTGGTCACTCCTACTTTGGTGCCTCCCTGAACAGCTTCATCCATGTCCTGATGTACTCTTACTATGGGCTCTCTGCTGTTCCGGCCTTGCGGCCCTATCTATCTATGGTGGAAGAAATACATCACACAAGTACAGCTGATTCAGTTCTTTTTGACCATGTCCCAGACAATATGTGGCCATGTGATTTCCCCAGAGGGTGGCTGTATTTCCAGATATTCTATGTCGTCACACTTATTGCCCTTTTCTCAAACTTCTACATTCAAACTTACAAGAAACACTTTGTTTCATCATCAGAATGGCTCTGTTGCTTCATTGAATGGCCATGTGAATGGGGTGACACCCACGGAAACCATTACACACAGGAAAGTGAGGGGGGACTGAATCTTGAATACTGTTACAATCCTAACTGTAGGacatatctactgtatgtaatgatgcTAGGAGAGAAGGGATAATACATTTCTTCAGGA

Function

symbol description
elovl2 Predicted to enable fatty acid elongase activity. Acts upstream of or within very long-chain fatty acid biosynthetic process. Predicted to be located in endoplasmic reticulum and membrane. Predicted to be integral component of membrane. Predicted to be integral component of endoplasmic reticulum membrane. Is expressed in several structures, including fat cell; head; liver; pleuroperitoneal region; and yolk syncytial layer. Orthologous to human ELOVL2 (ELOVL fatty acid elongase 2).

NR:

description
unnamed protein product

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110537083 True 1000 mRNA 0.46 1 17179487 17180486

Neighbor

gene id symbol gene type direction distance location
LOC118937877 NA coding downstream 41513 17135946 ~ 17137974 (-)
LOC110537079 rilpl1 coding downstream 50308 17111763 ~ 17129179 (-)
LOC110537076 LOC106568285 coding downstream 81297 17068181 ~ 17098190 (-)
LOC110537077 LOC106568284 coding downstream 111467 17065241 ~ 17068020 (-)
LOC110537073 LOC106568283 coding downstream 114896 17042371 ~ 17064591 (-)
LOC110537086 LOC106568301 coding upstream 69586 17250072 ~ 17256274 (-)
ddx55 ddx55 coding upstream 89191 17269677 ~ 17275098 (-)
LOC110537089 tmed2 coding upstream 94760 17275246 ~ 17279138 (-)
LOC110537091 LOC106568276 coding upstream 321718 17502204 ~ 17524387 (-)
LOC110537096 LOC106562702 coding upstream 376649 17557135 ~ 17576537 (-)
G1043589 NA non-coding downstream 12166 17166815 ~ 17167321 (-)
G1043584 LOC106568292 non-coding downstream 23112 17155952 ~ 17156375 (-)
G1043577 NA non-coding downstream 40014 17139171 ~ 17139473 (-)
G1043545 NA non-coding downstream 44423 17077789 ~ 17135064 (-)
G1043550 NA non-coding downstream 93715 17059200 ~ 17085772 (-)
G1043567 LOC106561138 non-coding upstream 55981 17236467 ~ 17239891 (-)
G1043633 NA non-coding upstream 63011 17243497 ~ 17243760 (-)
G1043636 NA non-coding upstream 64321 17244807 ~ 17246167 (-)
G1043635 NA non-coding upstream 67035 17247521 ~ 17248292 (-)
G1043640 NA non-coding upstream 78082 17258568 ~ 17258888 (-)
LOC110537061 LOC106568319 other downstream 634761 16417638 ~ 16549073 (-)
LOC110537059 LOC106568318 other downstream 851373 16324956 ~ 16328168 (-)
G1042500 NA other downstream 1074604 16104163 ~ 16104883 (-)
G1040432 LOC106568413 other downstream 2868435 14307600 ~ 14311052 (-)
G1044482 NA other upstream 515643 17696129 ~ 17697105 (-)
G1044649 LOC106568140 other upstream 837618 18018104 ~ 18018758 (-)
G1044671 NA other upstream 875625 18056111 ~ 18058392 (-)
G1044692 NA other upstream 917077 18097563 ~ 18099722 (-)
G1044761 NA other upstream 1011748 18192234 ~ 18193223 (-)

Expression


Co-expression Network