LOC110537086 (LOC106568301)


Basic Information

Item Value
gene id LOC110537086
gene name LOC106568301
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 17250072 ~ 17256274 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021622851.2
AGGTTTTCCATAGTTGAGTTTGTGTGGCTTTGTTCTGCTGTCTGTATTACTGTGGGGAAACAAGGCGCATCTCTGCAGCGGGCCCTACTCGCTCCTCTCCACTTGGCGCAAGCGCGCTGGCTCCTCTGTGCGCTCTGTACGGTGTGTTTGCATTGTGTCAGAACTGCCGGCGAGCTTTAAAATATTTCCAAGCCTTCCAACCGCGGCAATGTCGGGCAGGTCGGTACGAGCCGAGACTCGAAGCAGGGCGAAAGATGACATCAAGCGGGTTATGGCCGCGATTGAGAAAGTACGGAAATGGGAGAAGAAATGGGTGACAGTTGGAGACACATCCCTGAGGATCTTCAAGTGGGTTCCAGTGACTGAGCCCAAAACAGCAGATGAAAAGAAGAAGGGGAAGGATGAGAAGTATGGGTCAGAATTGACCACACCAGAGAACAGCTCTTCTCCTGGGATGATGGACATGAATGACGACAACAGTAACCAGAGTTCTATCGCTGAATCCTCCCCCGTCAAACAGGAAACCAGCACTAGCCCAGCCCCCGAACCCACCACCGTATCCCATGGCGACAACAGTGAGGCCAAGAGCGACCAGAGCCCTGACTGCAAGAGGGTGAAGAGCAACCCATcagagagggacaagagagacagCAGCCAGACTTCCTCGGGAGAAAAGGACACCTCAGACAGCCGCAAAGCCACTCTGGATCCAGAGGAAGAGGCTCCTCGCAGTAAGAAGAACAAGCAGGAGTCTCCATCTCAGGACTACGAGGAGAAATAGTCACACTGCAtcctttcttctctctatcctcttcctcccccacGTAGCCCCTAACACTCCTCTGAGCAGAGGGAGAAAGGACTTTACCTCCCTTCACTGagcccctcttctcttcttccacACTCACTAATGCCAAGAATAGCTCTGTGATCCAGCCTGTTATCTCCTCCATGACCAGGGGTTGCGCAGTGTGCTCAGCTCAGCCCAGAAGAGAAAAACACTAcggcgtctcaaaatggacaaactgCTATTGACGCTTTTTCTCGTTTTTTTTAagcaaaggtcttttaagggagtatgcaagcACACTCGTTCTGTTTGGCTAGCCGAGTTCGGCTAAGcaccagccgaactgaagcatgctgacgccttaaGGGCATCTTCTAACCCAAGAGCCACGTCAAACCTCCCCCTAACTCACCTCTGGTtgatacagtgtttgtttaggTCAGTTTCCAGTTGTTACGTTTAGTTTTGGGGTTGTTTTTTTTAGCTCAGGAGGGTCAATGCACTGCTAAGATATAATGtcacacaaacaacacaccgTGGTTTTACTGCTGCTGTACTGGGTGTGGATTTGTGTCTTTTTTTTACAAaatggcttgtgaaagtattcacccccttggcatttttcctattttgttgccttataacctggaattaaaatttatttttggggggtttgta

Function

NR:

description
B-cell CLL/lymphoma 7 protein family member A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021622851.2 True 1468 mRNA 0.50 6 17250072 17256274

Neighbor

gene id symbol gene type direction distance location
LOC110537083 elovl2 coding downstream 69586 17179487 ~ 17180486 (-)
LOC118937877 NA coding downstream 112098 17135946 ~ 17137974 (-)
LOC110537079 rilpl1 coding downstream 120893 17111763 ~ 17129179 (-)
LOC110537076 LOC106568285 coding downstream 151882 17068181 ~ 17098190 (-)
LOC110537077 LOC106568284 coding downstream 182052 17065241 ~ 17068020 (-)
ddx55 ddx55 coding upstream 13403 17269677 ~ 17275098 (-)
LOC110537089 tmed2 coding upstream 18972 17275246 ~ 17279138 (-)
LOC110537091 LOC106568276 coding upstream 245930 17502204 ~ 17524387 (-)
LOC110537096 LOC106562702 coding upstream 300861 17557135 ~ 17576537 (-)
LOC110537100 LOC106568268 coding upstream 425511 17681785 ~ 17710237 (-)
G1043635 NA non-coding downstream 1780 17247521 ~ 17248292 (-)
G1043636 NA non-coding downstream 3905 17244807 ~ 17246167 (-)
G1043633 NA non-coding downstream 6312 17243497 ~ 17243760 (-)
G1043567 LOC106561138 non-coding downstream 10181 17236467 ~ 17239891 (-)
G1043589 NA non-coding downstream 82751 17166815 ~ 17167321 (-)
G1043640 NA non-coding upstream 2294 17258568 ~ 17258888 (-)
G1043654 NA non-coding upstream 27551 17283825 ~ 17284118 (-)
G1043643 LOC106562610 non-coding upstream 32311 17288585 ~ 17288920 (-)
G1043671 NA non-coding upstream 71689 17327963 ~ 17328188 (-)
G1043676 NA non-coding upstream 81612 17337886 ~ 17338096 (-)
LOC110537061 LOC106568319 other downstream 705346 16417638 ~ 16549073 (-)
LOC110537059 LOC106568318 other downstream 921958 16324956 ~ 16328168 (-)
G1042500 NA other downstream 1145189 16104163 ~ 16104883 (-)
G1040432 LOC106568413 other downstream 2939020 14307600 ~ 14311052 (-)
G1044482 NA other upstream 439855 17696129 ~ 17697105 (-)
G1044649 LOC106568140 other upstream 761830 18018104 ~ 18018758 (-)
G1044671 NA other upstream 799837 18056111 ~ 18058392 (-)
G1044692 NA other upstream 841289 18097563 ~ 18099722 (-)
G1044761 NA other upstream 935960 18192234 ~ 18193223 (-)

Expression


Co-expression Network