Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110537098 |
| gene name | pi4ka |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 17618250 ~ 17663678 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| pi4ka | Enables kinase activity. Involved in multi-organism membrane organization; viral RNA genome replication; and viral replication complex formation and maintenance. Acts upstream of or within phosphorylation. Located in cytoplasm and plasma membrane. |
| description |
|---|
| phosphatidylinositol 4-kinase alpha-like |
| id | description |
|---|---|
| K00888 | PI4KA; phosphatidylinositol 4-kinase A |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036937090.1 | False | 6250 | mRNA | 0.54 | 48 | 17618250 | 17661447 |
| XM_036937088.1 | False | 8082 | mRNA | 0.51 | 51 | 17618251 | 17663678 |
| XM_036937089.1 | False | 8037 | mRNA | 0.51 | 51 | 17618251 | 17663678 |
| XM_036937091.1 | True | 7738 | mRNA | 0.51 | 49 | 17624286 | 17663678 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537097 | LOC106568272 | coding | upstream | 21115 | 17579225 ~ 17597135 (+) |
| LOC110537094 | ci167 | coding | upstream | 59206 | 17543370 ~ 17594573 (+) |
| LOC110536805 | brap | coding | upstream | 79473 | 17529711 ~ 17538777 (+) |
| LOC110537092 | LOC106568278 | coding | upstream | 116151 | 17468311 ~ 17502099 (+) |
| LOC110537090 | LOC106568279 | coding | upstream | 150404 | 17359403 ~ 17467846 (+) |
| LOC110537101 | LOC106562742 | coding | downstream | 50482 | 17714160 ~ 17717729 (+) |
| LOC110537103 | xpo7 | coding | downstream | 167544 | 17831222 ~ 17858119 (+) |
| LOC110537106 | LOC106568134 | coding | downstream | 199839 | 17863517 ~ 17886525 (+) |
| LOC118937634 | NA | coding | downstream | 225696 | 17888059 ~ 17891148 (+) |
| LOC110539121 | LOC106608263 | coding | downstream | 300589 | 17964267 ~ 17965587 (+) |
| G1043752 | NA | non-coding | upstream | 207581 | 17410378 ~ 17410669 (+) |
| G1043679 | NA | non-coding | upstream | 278888 | 17339135 ~ 17339362 (+) |
| G1043677 | NA | non-coding | upstream | 279120 | 17338732 ~ 17339130 (+) |
| G1043674 | NA | non-coding | upstream | 288324 | 17329676 ~ 17329926 (+) |
| G1043827 | NA | non-coding | downstream | 3602 | 17667280 ~ 17667557 (+) |
| G1043997 | LOC106568268 | non-coding | downstream | 18162 | 17681840 ~ 17689055 (+) |
| G1043999 | NA | non-coding | downstream | 28341 | 17692019 ~ 17692284 (+) |
| G1044013 | NA | non-coding | downstream | 42544 | 17706222 ~ 17706624 (+) |
| G1044006 | NA | non-coding | downstream | 55103 | 17718781 ~ 17718986 (+) |
| G1043449 | tmed2 | other | upstream | 339132 | 17275268 ~ 17279118 (+) |
| G1043245 | NA | other | upstream | 626905 | 16909786 ~ 16991345 (+) |
| G1041576 | yo84 | other | upstream | 2009798 | 15604625 ~ 15608452 (+) |
| G1041494 | LOC106568352 | other | upstream | 2100488 | 15464803 ~ 15564470 (+) |
| G1041432 | NA | other | upstream | 2255508 | 15344919 ~ 15362742 (+) |
| G1044002 | NA | other | downstream | 57415 | 17721093 ~ 17729254 (+) |
| G1044056 | NA | other | downstream | 222975 | 17886653 ~ 17887917 (+) |
| G1044201 | NA | other | downstream | 412124 | 18075802 ~ 18077300 (+) |
| G1044265 | NA | other | downstream | 632252 | 18295930 ~ 18296402 (+) |
| G1044317 | NA | other | downstream | 728968 | 18392646 ~ 18393341 (+) |
