LOC110537100 (LOC106568268)


Basic Information

Item Value
gene id LOC110537100
gene name LOC106568268
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 17681785 ~ 17710237 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021622869.2
CTTTTATTTAAATTTGGGCCAGGGGGTAGGCTTCCCAGGGAAATAGCCTGCAGTGGCAAGATGGCGAACAGAGGGTTGTGAGGTGGGATGGTAAATGAAAAACGCGTTCATCGATGAATTAAGgtgTGTAAACCAAAGTGTGTGTGATGGAACAGCAGAATCATTCAAAGCAGCTGCTACTGCAGCTGAACCAGCAGCGAGCCAAAGGATACCTGTGTGATGTCATCATCGTGGTGGAGAACGCGCTGTTCCGCGCCCACAAGAACGTCCTGGCGGCTAGCAGCGTCTACTTCAAGTCGCTGGTCCCCCACGACAACCTCATCAACCTGGACACAGAGATGGTCAGCCCCTCCATTTTCAGACAGGTGTTGGACTTCATCTATACAGGTTGTCTGTCCAGTTCTGACTCTGTCAGTGACCACAGTATCTCGTCTCTCCTGATCGCCGCCTCCTACCTCCAGCTGACTGAACTGGCTGCTCTCTGTCGCAGGAAGCTCAAACACAACGGTCAGACCCCCTCCAGCTCCAACAAGATGaccccctcctcttccacctccccaACCCCAAATGGACACACCCCTGgccccctctgcctctcctccacccccctccacaaCCACCAGCACCATAACAACCACTCAGGGTCCAAGAAGGGGAGCCAGAGGAACCAGAGACCGAGCCAGGAGGGAAGGCTGAGAGAGGATCTGTCCGAGAAGGTGTTTATTTCAGGCTCGCGCTGTGCCTCCCTCAGCCCCTCTGGAGAAGGTAGGAGTAATGGGCTGGGACTGGACCTGTCCAAAAGGAGTCCGTCAGAGAGCACTGCCACAGAGGAGGTGTCCCCCAGCAGTCTGCTCCAGAGCTCttccccccactcctcctctctctcccccactcccacTCCTCCCACAACGTCTAGTGCCAAGCCAGAGCCTCCAAAGACCTCCACAGACCTCCAGCCCAGAGCCCCTCGCAAGAGGCCCCGAGGTGATAAAGTGACCCCAGAGCtggaggatggagaggtggatggagaggagaacggTCTAGATCAGAGTGAGGGGAGCGGGcacagtggaagaggaggaggaggaggaggaggaagaaaaggGAGGAGAAACGGAAACACCAACTACATCTACCGTCAGCCCCAGCCAGGGTTTGAGCCAGGTGTGGGGGACAACCTGTACGTCTGCATCCCCTGTGGGAAAGGCTTCCCCAGCTCAGAACAGCTCAATGCCCATGTCGACACACACACCCACGACCAACTCTACCTgaaagacgaggaggaggaagaggaagaggaatgtGGTGGATACTTGAAGGACAAAGATCCGGACACATGCCCAGATGACTCTGCATCAAAGGGGATGAAGCCTGACCCTGAAGAACCTGGGCATCTCTGCACTGTCTGCAGTAAGAGCTGCAAGGACGCGACATCACTACGGCAACACGAGAAGAGCCATTGGCTGAACAGGCCATTCCCCTGTAACATCTGTGGCAAGCTGTTCACTCAGCGAGGCACCATGACGCGCCACATGAGGAGTCACCTGGGCCTCAAGCCCTTCGCCTGCGAGGAGTGTGGCATGCGCTTCACACGACAGTACCGCCTCGCCGAGCACATGCGGGTCCATTCGGGGGAGAAGCCCTACGAGTGCCAGCTGTGTGGTGGAAAGTTCACCCAGCAACGCAACCTCCTTAGTCATATGCGGATGCACACCTCGCCCTCATAGAGGACACTTCACCATGGTTACTGCAGCTGAACCACAGCTACCTGGGTTCTATTAGGCTGTCTACCTCATTTTCAGCTAACCATCTGGAGCCTCAGTTACCCATAGTACCTCCTCACCCTTGTAAACACACCTGGCTTCTACCTCATTTTCAGCTAACCATCTGGAGCCTCAGTTACCCATAGTACCTCCTCACCCTTGTAAACACACATGGGTTCTACCTCAACTTCAGAAACTCACCTTGAAATGAATTACCTCACCTTTATAACCACTCACCCCGAGTAGTAACTTTACCAATATTTTCAACCTCTTAACAACTATCACTTATACCCTCACCCTCGTAACAACTATCACCCATACCCTCACCCTCGTAACAACTATCACCCATACCCTCAACTAGGGATTCATATTTTCACGAAAACCTACCAAGTTTTAATACAGGGAATAATTGATATTTATCCCAAGAGTCCCGGGAAATACCGCAAAAAAATTGAAGTGCCCATTCTCAGGCCTTTAAAACCAAGATATGTCACTATGCCTGGGTTCTCCCAAAATAAGATTGTCGCTGTGCCACAATGCCGGCATGGCTGCGCCACTGTAAAGATTTCACAGCAAGTGAAACTGATATTTAGTATTGATAGAGTAACTTTGATCACCAATGACATTGTTGTGAATTGCGAAACAGGCCGTTCATGAATTCCGAGCATTATCATGTTACTCAGTTAATTTAGCCCAGGACTACTGCTGAAATATGCTATCTCGAGACAGAGCATGGTCAGGACCCACAGAGCGCACCCAGAGTAGGCTATAGTGTTGTCGAATCATACAAACTTTGTAACGGCAGTCAAACAAAAGTCAAATGACTAAAGTTGCTACGCTTGTTAACCTCCATCGAATGACAAAATATCTCCTATTTGGCAAAATGGAGTTGATGATTATACAGATAGCAGATCAGCTCATGAATAACTAGTAGTTGAAGAAAGGAAATTGTTTTAAAGATCAATGTATCTTAACGGGGACCATACTCTCTACTCTCAAACTGTTTGTTGATCTCACATTCTGTACCGATGCTCTCATATGGTCAGAAATACGAAACAGCGCAGAGAAGCGGGGGAAATGTTCCAGGTATTTTGACATGCATTGTTTTATTTTtgatttattgaacctttatttaattaggcaagtcagttaagaacaaattcttatttacaatgacagcctaccccggccagacCCTGACCCGGAAGacggtgggccaattgtgcgccgccctatggaactcccaatcacggccggctgtgatacagcctggaatcgaagactctgcactgagatgcagtaccttagaccgctgcgccactcaggagcataAGCAGACATGCATTGATAGTGCAACCTATGGATTACAGAATGAAGAGACAAGAGTCAAGATTTCTGGTTTCAGTGGGATTATTGGGACTATAGGAAAATTGCCTAGGCTCTATATAAGGACCTGAGTCAATAGATAATACACTTGAATTTGGCTACATTATTCCAttctaaatgtttctgatcagtgataaACAAATAAATTAACTATTACTTCTACTTGCCCAGCCAAGATAAATTAACCAAATATATAGacagagattcagtgaaacaaaatcacattgattgattgacacaGGCTTTTTGTTGCGAGTAGGACAGGCTACAATGCGAGTGAAGAGCAAGCAGACTTGTATAACATGCTAGCAACATTTTCTGATCAGCTAATATATGAGCAAACTAGAGTAAAGATGATCATTAGCACTCACCTCAACTTGACTAACATTTCCCCAGCCTACCAAAtatccaaacggagattcagtgaaaacaaAAACCGGACATTGATTGATTTATCTAGACGAGTACCCCACGTTTGTCTCGAAGCAGTGCGATGGTGCTGTCTCAATTAAAACTGCTGAAATGATCATCTAGGTGACAACACACGACTATTGCTTTAATTTAGTATAACGGTTGGATATAACTTTGGCAGGATCAGTGTAACCAAGAATTTGATACATGCAATAAATTTGCTTTCGCCTACTTTATTCTAATATTTTCATCATTCAGTTGATCATAACTCAGGTGTTGTCCTCTCTCTGCGCTTTTCCTCAGCCCAATGCCTGTTTCCTCGTCTCCTCACTCCGGCGCTTCCCACCTCCACCACGTTATTCTCAACACCAGTTTAAATCAATATAGCCTACTGTTATCTAGAAATCTGCCATTTTTTTTATTCTGTGATGTCGGACCAGGCCTGGGATCAGGCTTCAGCTCACTGGCTTGGGTCGGCCCGGGATCGAATTGTCATTTCTGATGAGAACTCTAAACTGCATTCGGGCCTTGTGTGCAATCCGGCATTTGCTTTGCATTTATGACGACTTTGTGTAAAGAAAATATGCTAGGTTAAAGGCTTCCATGTGACAACTTGTTTGGATAATGTACCATTTTATTTTTTGCCAATCTGCTGCTGTAGATGTTGGGCATTTGGTGGAATTGCATTACTGCGACATCGGGGTAAATTTGGTCATTTCCCGGGTCTTGTCACAAATGTTTTTCGGGAAATGTGACAAGTGGTCCAGAGACAGTCCCAGGATCCCGGTTACCAGTGTTAATCCGTACCCTCAACCTCTTAACAACTATCACCCATACCCTCATCCGCTTAACAACTATCGCCCTCATCATGGCAACCATGATTCCATACCTCTATTTGAGAACTGTTCCTCATCTTACTAATACCAACCATTACTTCACCCTTAGAACCCATCATAAATCCacattcagccagccagccagctgttctgGCTATCTCAGGGTCAACACACCACACCTCTCCATCTGACATAAAACCAAAGACGCCTTCCTCCCCATCCCAGGTGGCTCAAATATGTTTTGATGATAGCTTTTAGCATCCAACCAAACTAGCCCTCCCAGGGTATCAGTCCGTGCTGTCGTTCCTCCAGGCTGTTGTAGCTGTCTCTCGCTGGCCAATGGGGGACCTCATTGGCTCTCCTGCCTCATTATCAGACACATACTGGACCCCAGGCAAAGTTGGCTAGCAGTCACTAATATTATGTTCTCCAGCTAGATAGGACAGGTGAGTCAGCCTAGCCAGTGTGCATATAATAACTTATCACCTTTACATACACTGCCTGTTGGAAACGTGGCATTATTAGAAAATGATCAGGGGTGTTCTAACAGCAATGTTTGCTTTATTTGTAGTTCATAGGTCAGACTTTGTAGTTTAACTTGGGTGTAAAATGTTTGAGAACTTAGTTATGCGTTTGTACTGGGTATTTCTACTTTAAGGGGTTTGGGTCAGGTGGGGGTGTTTCTTTTTAATTTGAGGCATCATATTCTGTTGGTACCGTTGTTTTGTCTGCATTTTTAAAAGGCTGGTCTACTGCTACTAGCCCTGTCACACTGCTACCTCTTCACTCTTCACATTAACCATTGAATAATACTCTCCCAGTATCCCTGTATTAAGTTTGCTGTTGGTTTTCAACAAGTTCCTCTCGTCTGTTAATGCTGTGAGGGGAGAGTATTGCTTCCTGGATAAGTGTGTTACTGGTACTAGTGTATGATATTGTAAGGTGAAATCCAAAGAGAAAATTATTGCAAACTAACAACAACTAACGTTTTTCAATGTCAGTGTAGTTTTAACAATACTATTGTGTCCACTCCTAGTTCCACACTAACAGCCTTGTGGTAGAAATGACTCATGTTGATTGGACCAACCTCACCTCATTGCCTTACTTTGTCTTCACTATGTCCTCAGGAGGACTACATACGTGTCATTTCTGAACATCTAAGAATGTGTTGTAATTGCTTCGTTTTAGACTAGTAAGTACATAGTTTTAAAATTCTCTTTCCTACATGTTTATCACTTAAGTGTTGAAAAAAAGTCATTTTTACTTCAGAAAAGTGTAGATAACTCAGGAACATTGATGTCAGGGTCTGGCGTCCATAAAGTACATATCCACACTTATGAGTTCCGTTAAACTGCAAGACTCTGGTTGTTTTGGTTCAGGCATTTAGAATGTCGACAAATGAAAGAGCAGAGCGAAAAGGATCAACATGTTTCAGCTGTGAGGGTGATAACTCTAAACCATATCTTCAGGGATGGTTCCTCACATTTTAACTGAAGAACCCTCTGCTGTGTTGTCAAACTGTCTGTACTGTCAGAAAGCAAAAACACTAGTTTCCTAAGCAAGAGATTTTTTAAAGGAGGTGGGTGGTGATTATCTTTCAAATAACTTCTGGATAAAAGGTAGAGGTGTTTAAAATATATTATAAAATATTAGTTCTTGAATGTTATCAGCATGCATTGTATAAAAGATACAAGCTTGTTCCAAATCAACAGACTATTTTCTAAACCAAAGCACATACTGAACGACTGACGGCTTGTGTGGTGtaaagtgtgagtgtgtgggagCGTGATCTCATTGTTTACATAAACCCAACAGTCAGACCTCAGGCAAGGAATCGTTTTTTCACGTCTAGAAACAAAGAAAAGAACAGCATTGTTTATTTGCATGTATTGTTGAGCCTGTAAACTTAAGTATCCGCATGTTATGAAAATATGATGAAGCCATTTTTGATATCTTGTTTGTTGTTGATTGTTTGTTGTGACCAACCAAATGTTTTACGAAGGGGTAGAAACAACATGTGAAAATGGAGTAGGCTGTAATATCAAGTTATTTAGTCTACAACTCATTATTTTTAAGAATAGGAAATATTACCTCCTAGTACACCAGTCAGGGATTTGGTCACAAACCCTTTATCCAGTTACATTATTCTATTtatctcttactgtctctctctcttattaagtAAGTTGTTGCAGTCACTTCCAGACAGAATGTATTTATTAGTTGGATCCTGTTTTAAACCGCTTTATGATATCTCAGTGGATGATAGTCAGGGGCTTTATTACTTTGTTACTGCTAATACAGTTTAGAGAGAAAATATGTTATTAAAGGGTTAGTTAACCCCAAATAGCTTGACAACCACTCTGTGTGAGAACGTCAAACCGTGATTTATTGGGTGAAAGGACCCTTTAAACATGATATGGCTATAAGTAAGATCAAGCTCCCAGCCCAAGACACTGGAGACAGTGGGAATGTACTGCTCCTGTGGTATAGGTGTTTTGTACCGCTTTTACCTCATCCAAAGCATGTAGAACACAAAGATGAAATGTTTTTTATTGTGCTACATTGTTTCCTGTTTTTCTGAGAATGtaatctgtgttgttgttgtcatctGTTCTATAGGTGGTCTTATTCATTGGTATGGGACCACTGACTCCTGGTACAGATGCAATATGTATTGTATTCTACAGAAAGCATTGGTTTTGTCAAAGCAACTTCTGTTAAAGGCTGGTATTGTTACTATTACAGAGACGCTTCTTGTTTAATCTCTATCTGAAAACCAAAGGTGTCTATGGCAGCATAAATATGTACATAGTCACATGTGCCACTACTAATCCAAACCAAGCCACTTATGAACTAAACCAAAGGCAGTCTAAGGCAGCAGGTCTATTCATATAATTCCTAAGACTTCTGGGCATGAAACCATGTCAAAGCTGGCTTTATGTATTCATTTACTCTGTCTTTGTACAACAAGTTTCTCTGTTCTACTAAATATTTgttcaattatatatatatttttctcagtCTTCAACATGCTTTACTGAGAAACTCCAAAGTTCAATTCCTCAGAGCTTGTGTTCAGGAGTTTCTTGATCCGTGTGGTTCTCGCTGCACCACCACGTGATTCAACACAGCGTCATGATTCAGAGTCCACTGGTTAACCTGCAGTCTCTTAATGTACAGATATGAGTGTCATCTTTATAAAGATCTTTTCATTAAACTTGATTGGAAAGAACTAAATGTT

Function

NR:

description
hypermethylated in cancer 2 protein-like

GO:

id name namespace
GO:0005488 binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021622869.2 True 7640 mRNA 0.44 3 17681785 17710237

Neighbor

gene id symbol gene type direction distance location
LOC110537096 LOC106562702 coding downstream 105248 17557135 ~ 17576537 (-)
LOC110537091 LOC106568276 coding downstream 157398 17502204 ~ 17524387 (-)
LOC110537089 tmed2 coding downstream 402647 17275246 ~ 17279138 (-)
ddx55 ddx55 coding downstream 406687 17269677 ~ 17275098 (-)
LOC110537086 LOC106568301 coding downstream 425511 17250072 ~ 17256274 (-)
LOC110537102 LOC106568267 coding upstream 10940 17721177 ~ 17729244 (-)
LOC110536806 LOC106568132 coding upstream 43726 17753963 ~ 17808512 (-)
LOC110537108 LOC106563398 coding upstream 149863 17860100 ~ 17863387 (-)
LOC110537109 pp2bc coding upstream 181657 17891894 ~ 17912969 (-)
LOC100135895 LOC100135895 coding upstream 225491 17935728 ~ 17940707 (-)
G1043996 NA non-coding downstream 901 17680677 ~ 17680884 (-)
G1043986 NA non-coding downstream 9844 17671644 ~ 17671941 (-)
G1043950 LOC106568269 non-coding downstream 29101 17652288 ~ 17652684 (-)
G1043980 pi4ka non-coding downstream 37173 17643604 ~ 17644612 (-)
G1043887 NA non-coding downstream 55402 17595109 ~ 17626383 (-)
G1044513 NA non-coding upstream 19266 17729503 ~ 17732067 (-)
G1044516 NA non-coding upstream 25649 17735886 ~ 17736114 (-)
G1044517 NA non-coding upstream 26136 17736373 ~ 17736643 (-)
G1044526 NA non-coding upstream 34763 17745000 ~ 17745200 (-)
G1044500 NA non-coding upstream 41957 17752194 ~ 17752956 (-)
LOC110537077 LOC106568284 other downstream 613900 17065241 ~ 17068020 (-)
LOC110537061 LOC106568319 other downstream 1137059 16417638 ~ 16549073 (-)
LOC110537059 LOC106568318 other downstream 1353671 16324956 ~ 16328168 (-)
G1042500 NA other downstream 1576902 16104163 ~ 16104883 (-)
G1040432 LOC106568413 other downstream 3370733 14307600 ~ 14311052 (-)
G1044649 LOC106568140 other upstream 307867 18018104 ~ 18018758 (-)
G1044671 NA other upstream 345874 18056111 ~ 18058392 (-)
G1044692 NA other upstream 387326 18097563 ~ 18099722 (-)
G1044761 NA other upstream 481997 18192234 ~ 18193223 (-)
LOC110537121 LOC106568150 other upstream 736444 18439759 ~ 18458056 (-)

Expression


Co-expression Network