Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110537141 |
| gene name | LOC106568166 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 19434894 ~ 19445330 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| calcyphosin-like protein |
| id | name | namespace |
|---|---|---|
| GO:0005509 | calcium ion binding | molecular_function |
| id | description |
|---|---|
| K23909 | CAPS; calcyphosin |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021622947.2 | False | 2051 | mRNA | 0.42 | 5 | 19434894 | 19445330 |
| XM_036937130.1 | True | 1977 | mRNA | 0.42 | 5 | 19434894 | 19445330 |
19,428,000
19,430,000
19,432,000
19,434,000
19,436,000
19,438,000
19,440,000
19,440,000
19,442,000
19,444,000
19,446,000
19,448,000
19,450,000
19,452,000
NC_048576.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537140 | LOC106568164 | coding | upstream | 900 | 19409650 ~ 19433994 (+) |
| LOC110537131 | plchb | coding | upstream | 335937 | 19088010 ~ 19100184 (+) |
| LOC110539124 | LOC106568242 | coding | upstream | 499893 | 18933045 ~ 18935001 (+) |
| nnt | LOC106568155 | coding | upstream | 787033 | 18578414 ~ 18647861 (+) |
| LOC110537124 | LOC106568151 | coding | upstream | 922839 | 18492792 ~ 18512055 (+) |
| LOC110537145 | LOC106568170 | coding | downstream | 126440 | 19571770 ~ 19576332 (+) |
| LOC110537147 | LOC106568174 | coding | downstream | 178908 | 19624238 ~ 19644638 (+) |
| LOC110537148 | LOC106568173 | coding | downstream | 200637 | 19645967 ~ 19711463 (+) |
| LOC110536811 | LOC106563918 | coding | downstream | 280834 | 19726164 ~ 19745172 (+) |
| LOC110536812 | LOC106568176 | coding | downstream | 302711 | 19748041 ~ 19769545 (+) |
| G1045931 | NA | non-coding | upstream | 26697 | 19407989 ~ 19408197 (+) |
| G1045928 | NA | non-coding | upstream | 29673 | 19405005 ~ 19405221 (+) |
| G1045924 | NA | non-coding | upstream | 32140 | 19402528 ~ 19402754 (+) |
| G1045923 | NA | non-coding | upstream | 33577 | 19400918 ~ 19401317 (+) |
| G1045921 | NA | non-coding | upstream | 37009 | 19397613 ~ 19397885 (+) |
| G1045945 | NA | non-coding | downstream | 14064 | 19459394 ~ 19462593 (+) |
| G1045961 | NA | non-coding | downstream | 33948 | 19479278 ~ 19479500 (+) |
| G1045962 | NA | non-coding | downstream | 34210 | 19479540 ~ 19479897 (+) |
| G1045966 | LOC106568167 | non-coding | downstream | 41644 | 19486974 ~ 19487202 (+) |
| G1045967 | LOC106568167 | non-coding | downstream | 41980 | 19487310 ~ 19487768 (+) |
| G1045418 | NA | other | upstream | 468952 | 18965568 ~ 18965942 (+) |
| G1044317 | NA | other | upstream | 1041553 | 18392646 ~ 18393341 (+) |
| G1044265 | NA | other | upstream | 1138492 | 18295930 ~ 18296402 (+) |
| G1044201 | NA | other | upstream | 1357594 | 18075802 ~ 18077300 (+) |
| G1044056 | NA | other | upstream | 1546977 | 17886653 ~ 17887917 (+) |
| G1046724 | NA | other | downstream | 698849 | 20144179 ~ 20147414 (+) |
| G1046823 | NA | other | downstream | 837556 | 20282886 ~ 20293851 (+) |
| G1046929 | NA | other | downstream | 1063939 | 20509269 ~ 20511519 (+) |
| LOC110537158 | LOC106568186 | other | downstream | 1245497 | 20667957 ~ 20694090 (+) |
| G1048417 | LOC106568221 | other | downstream | 2387764 | 21833094 ~ 21834812 (+) |
