Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110536811 |
| gene name | LOC106563918 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 19726164 ~ 19745172 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | name | namespace |
|---|---|---|
| GO:0006913 | nucleocytoplasmic transport | biological_process |
| GO:0005643 | nuclear pore | cellular_component |
| GO:0017056 | structural constituent of nuclear pore | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC110536811 | False | 5463 | mRNA | 0.41 | 33 | 19726164 | 19745172 |
| TU1192167 | False | 1903 | lncRNA | 0.41 | 3 | 19743031 | 19745165 |
| TU1192182 | False | 1807 | lncRNA | 0.41 | 5 | 19743031 | 19745165 |
| TU1192205 | True | 1659 | lncRNA | 0.41 | 4 | 19743031 | 19745055 |
19,720,000
19,724,000
19,728,000
19,732,000
19,736,000
19,740,000
19,744,000
19,748,000
19,752,000
19,756,000
NC_048576.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537148 | LOC106568173 | coding | upstream | 14701 | 19645967 ~ 19711463 (+) |
| LOC110537147 | LOC106568174 | coding | upstream | 81526 | 19624238 ~ 19644638 (+) |
| LOC110537145 | LOC106568170 | coding | upstream | 149832 | 19571770 ~ 19576332 (+) |
| LOC110537141 | LOC106568166 | coding | upstream | 280834 | 19434894 ~ 19445330 (+) |
| LOC110537140 | LOC106568164 | coding | upstream | 292170 | 19409650 ~ 19433994 (+) |
| LOC110536812 | LOC106568176 | coding | downstream | 2869 | 19748041 ~ 19769545 (+) |
| LOC110537150 | LOC106568245 | coding | downstream | 44844 | 19790016 ~ 19821008 (+) |
| LOC110536813 | LOC106568177 | coding | downstream | 102243 | 19847408 ~ 19852295 (+) |
| LOC110537151 | LOC106568178 | coding | downstream | 121160 | 19866332 ~ 19869191 (+) |
| LOC110537152 | LOC106568180 | coding | downstream | 127302 | 19872474 ~ 19892580 (+) |
| G1045972 | NA | non-coding | upstream | 147854 | 19577768 ~ 19578310 (+) |
| G1046021 | NA | non-coding | upstream | 170847 | 19554881 ~ 19555317 (+) |
| G1046020 | NA | non-coding | upstream | 172136 | 19550967 ~ 19554028 (+) |
| G1046018 | NA | non-coding | upstream | 178991 | 19546906 ~ 19547173 (+) |
| G1046010 | NA | non-coding | upstream | 188897 | 19537023 ~ 19537267 (+) |
| G1046423 | NA | non-coding | downstream | 80151 | 19825323 ~ 19825679 (+) |
| G1046424 | NA | non-coding | downstream | 80741 | 19825913 ~ 19826202 (+) |
| G1046437 | NA | non-coding | downstream | 97864 | 19843036 ~ 19843661 (+) |
| G1046467 | NA | non-coding | downstream | 119306 | 19864478 ~ 19864699 (+) |
| G1045418 | NA | other | upstream | 760222 | 18965568 ~ 18965942 (+) |
| G1044317 | NA | other | upstream | 1332823 | 18392646 ~ 18393341 (+) |
| G1044265 | NA | other | upstream | 1429762 | 18295930 ~ 18296402 (+) |
| G1044201 | NA | other | upstream | 1648864 | 18075802 ~ 18077300 (+) |
| G1044056 | NA | other | upstream | 1838247 | 17886653 ~ 17887917 (+) |
| G1046724 | NA | other | downstream | 399007 | 20144179 ~ 20147414 (+) |
| G1046823 | NA | other | downstream | 537714 | 20282886 ~ 20293851 (+) |
| G1046929 | NA | other | downstream | 764097 | 20509269 ~ 20511519 (+) |
| LOC110537158 | LOC106568186 | other | downstream | 945655 | 20667957 ~ 20694090 (+) |
| G1048417 | LOC106568221 | other | downstream | 2087922 | 21833094 ~ 21834812 (+) |
