Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110537150 |
| gene name | LOC106568245 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 19790016 ~ 19821008 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| armadillo repeat protein deleted in velo-cardio-facial syndrome homolog isoform X5 |
| id | name | namespace |
|---|---|---|
| GO:0044424 | obsolete intracellular part | cellular_component |
| id | description |
|---|---|
| K23491 | CTNND2; catenin delta-2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036937148.1 | False | 3685 | mRNA | 0.52 | 16 | 19790016 | 19821008 |
| XM_036937146.1 | False | 3702 | mRNA | 0.52 | 17 | 19790017 | 19821008 |
| XM_036937147.1 | True | 3686 | mRNA | 0.52 | 17 | 19790021 | 19821008 |
19,764,000
19,768,000
19,772,000
19,776,000
19,780,000
19,784,000
19,788,000
19,792,000
19,796,000
19,796,000
19,800,000
19,804,000
19,808,000
19,812,000
19,816,000
19,820,000
19,824,000
19,828,000
NC_048576.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536812 | LOC106568176 | coding | upstream | 20471 | 19748041 ~ 19769545 (+) |
| LOC110536811 | LOC106563918 | coding | upstream | 44844 | 19726164 ~ 19745172 (+) |
| LOC110537148 | LOC106568173 | coding | upstream | 78553 | 19645967 ~ 19711463 (+) |
| LOC110537147 | LOC106568174 | coding | upstream | 145378 | 19624238 ~ 19644638 (+) |
| LOC110537145 | LOC106568170 | coding | upstream | 213684 | 19571770 ~ 19576332 (+) |
| LOC110536813 | LOC106568177 | coding | downstream | 26407 | 19847408 ~ 19852295 (+) |
| LOC110537151 | LOC106568178 | coding | downstream | 45324 | 19866332 ~ 19869191 (+) |
| LOC110537152 | LOC106568180 | coding | downstream | 51466 | 19872474 ~ 19892580 (+) |
| LOC118937812 | NA | coding | downstream | 200029 | 20021037 ~ 20026169 (+) |
| LOC110537154 | LOC106568183 | coding | downstream | 286338 | 20107346 ~ 20370543 (+) |
| G1045972 | NA | non-coding | upstream | 211706 | 19577768 ~ 19578310 (+) |
| G1046021 | NA | non-coding | upstream | 234699 | 19554881 ~ 19555317 (+) |
| G1046020 | NA | non-coding | upstream | 235988 | 19550967 ~ 19554028 (+) |
| G1046018 | NA | non-coding | upstream | 242843 | 19546906 ~ 19547173 (+) |
| G1046423 | NA | non-coding | downstream | 4315 | 19825323 ~ 19825679 (+) |
| G1046424 | NA | non-coding | downstream | 4905 | 19825913 ~ 19826202 (+) |
| G1046437 | NA | non-coding | downstream | 22028 | 19843036 ~ 19843661 (+) |
| G1046467 | NA | non-coding | downstream | 43470 | 19864478 ~ 19864699 (+) |
| G1045418 | NA | other | upstream | 824074 | 18965568 ~ 18965942 (+) |
| G1044317 | NA | other | upstream | 1396675 | 18392646 ~ 18393341 (+) |
| G1044265 | NA | other | upstream | 1493614 | 18295930 ~ 18296402 (+) |
| G1044201 | NA | other | upstream | 1712716 | 18075802 ~ 18077300 (+) |
| G1044056 | NA | other | upstream | 1902099 | 17886653 ~ 17887917 (+) |
| G1046724 | NA | other | downstream | 323171 | 20144179 ~ 20147414 (+) |
| G1046823 | NA | other | downstream | 461878 | 20282886 ~ 20293851 (+) |
| G1046929 | NA | other | downstream | 688261 | 20509269 ~ 20511519 (+) |
| LOC110537158 | LOC106568186 | other | downstream | 869819 | 20667957 ~ 20694090 (+) |
| G1048417 | LOC106568221 | other | downstream | 2012086 | 21833094 ~ 21834812 (+) |
