LOC110537151 (LOC106568178)


Basic Information

Item Value
gene id LOC110537151
gene name LOC106568178
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 19866332 ~ 19869191 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021622969.2
CAAAGCTGTTTTCCCTCGACCCCCACACCACCCTGTCAGCCCCGAGACAAACTGCCGTTGGATAAGGTAGAACTGTTCCGCAGGTATCCTCTGCTGAGGATCCTATTCTATTTCCATACTTGATACTCATCCTTTGGACCTGAACCCGCCTTTGACTCAGGCAGTCATGGTTACTCCAGTGTTCTCCATACTGGGCTACATCTACTCTCTGAGCCTCCTTCCTCTGCTGCTGCCTGGTTCCAGCCAGGGCAGTCCCATCATGTCACCTGAGGAGTTTCGAAGGGGCCCTGGGGCTAGAGGTCTGGTGGATACCTCCATGTTGGAGCAGAATGAAGACCTGGACATGCAGGACTTTCAGGGTCAGTTTCTGTCCACATTGAACCTCACAGAGCTGGGCCCCTGGCCAAGGCCCCGTGAGGCCCGTAAAGAGCCACCAGAATACATGCTGGAACTGTACAACCGCTTTGCCAACGATCGCACGGCCATGCCCTCTGCCAACATAGTGCGTAGTTTCAAGAATGAAGATTCCTCCTTCTACAGTGTGACGGTCAGGGGCGTGAGGACACACCCCCTGCTGTTCAACATCTCCATCCCCCACCACGAGCACATCCTCACCGCTGAGCTCCGCCTCTACACCCTGGTCCAGAGGGATCGCAGATGCTACGCCGGCCTTGATCGCAAGGTGACCATCTACAAGATCCACGAGGGGGGGCACTGGAGGAAAGAAGAGGGGAGGGACGAAAGAAGGTATGAGCAGGAGACAGACAAAATGGAGGAAATGGAGGTGCTGGCAACCCGGCAAATATATGGTAAAGACGATGCCTGGATTACCTTTGACCTGACTCATCAGGTCAACCTTTGGTGTAAGGCAGAGAGCTCCGCCCACCGACTGGAGGTCCACATTGCAAGTCTGGGTTCTGATGGTGGGAAGACCCCCCAGGTCAGAGAAGAGGATGGAAGGAAAGAGTTGGTCGATGTGGATGTTGACATGGGCTCAGATGGTAAACACATGCCAGTGGTGATTGTGTTCTCAGATGATCAGAACAGAGACCATCGTGAGGAGGACAAGCGGGAGCTCAACCAGTTTACAGAACATGAGAATGACCTGCCGGCTGACCTGGAGCCAAGTCCACAGGTGAATTGGGTAGACCAGGCTGGGAGCGATGCTAGGAACACTGATGGAGAGGAGCTGTATGAGGAGACTCTCATGCAACTGCACTCCAACCTCATTTATGACACGCTTCCCCGAATCCGCCGCAACACCAAGGGTGACCCCTGTAAGAAGAACCCTCTCTATGTGGAGTTTAAGGACATTGGCTGGGATACTTGGGTCATACAGCCCCTGGGCTATGAAGCCTATGAGTGCAATGGTGTATGCAGCTACCCCATGACCTCTGAGGTCTCGCCTACCAAGCACGCCATTGTCCAGAGTCGGCTGAGCAGTAAGATTCCACAGAAGGCGTCACCAGCCTGCTGTGTTCCCACCAAGCTAGAGCCCATCTCACTCCTTTATGTCGAGGACGGAGGAGTGGTCACCTACATGCACAAGTACGAGGGCATGGTGGTGTCAGAATGCGGCTGTAGATAATCATAGAACTGACTGTAGGTTcaggagagaggtatagagactgTGGATTAACGTAGACTGAGTGGTCATCAATTTCACTATCAAGAAGAAAATCAGATCAAAAGTGCCTATTTGAAAATAATACATTTCTGCAATCATTAAGGATACTTGCTTTGTGAGCTATTAGCAGACATATAGTGTAAACAGAATGCATACAGTAAACCATATTAAGGACATGAATCATTTCTATATCTATATTTTGCAGCATCAACTACATTGTATGACAAAGATAAACAGTGGAGGCGTAAATAGGAAGATGACAGAGCAAGAGGGTCCTGCCTGTATGTGCATTCAATTATGTACATTTGCCATTTGTAAAAGTACATTTCTTATTATATTGAGATTATATAAATGCTATTTTACAATGCCAgcaatataattatttttttttaagaaaaaaaaagtgaaatgtgAATATCATGCTGTTCTTTGTAGTTTGTGATCATACATTTGACTTTCATTTTGGCGATATTGGTATGTACCGTCAGATATACACAAAACCTTGTTGGTTTAAGTAGCTCTTGGTTTAAATGGTTGGTCCTGTATGGCTTAGTTGGTAGAGTATGGCGCTTACCAGGTCAgtattgtgggtttgattcctgtgtccacccatatgtaaaatgtatgcacgcatgactctTAAgtcgtgtctgctaaatggcatatatt
>XM_021622970.2
CAAAGCTGTTTTCCCTCGACCCCCACACCACCCTGTCAGCCCCGAGACAAACTGCCGTTGGATAAGGTAGAACTGTTCCGCAGGTATCCTCTGCTGAGGATCCTATTCTATTTCCATACTTGATACTCATCCTTTGGACCTGAACCCGCCTTTGACTCAGGCAGTCATGGTTACTCCAGTGTTCTCCATACTGGGCTACATCTACTCTCTGAGCCTCCTTCCTCTGCTGCTGCCTGGTTCCAGCCAGGGCAGTCCCATCATGTCACCTGAGGAGTTTCGAAGGGGCCCTGGGGCTAGAGGTCTGGTGGATACCTCCATGTTGGAGCAGAATGAAGACCTGGACATGCAGGACTTTCAGGATTCCTCCTTCTACAGTGTGACGGTCAGGGGCGTGAGGACACACCCCCTGCTGTTCAACATCTCCATCCCCCACCACGAGCACATCCTCACCGCTGAGCTCCGCCTCTACACCCTGGTCCAGAGGGATCGCAGATGCTACGCCGGCCTTGATCGCAAGGTGACCATCTACAAGATCCACGAGGGGGGGCACTGGAGGAAAGAAGAGGGGAGGGACGAAAGAAGGTATGAGCAGGAGACAGACAAAATGGAGGAAATGGAGGTGCTGGCAACCCGGCAAATATATGGTAAAGACGATGCCTGGATTACCTTTGACCTGACTCATCAGGTCAACCTTTGGTGTAAGGCAGAGAGCTCCGCCCACCGACTGGAGGTCCACATTGCAAGTCTGGGTTCTGATGGTGGGAAGACCCCCCAGGTCAGAGAAGAGGATGGAAGGAAAGAGTTGGTCGATGTGGATGTTGACATGGGCTCAGATGGTAAACACATGCCAGTGGTGATTGTGTTCTCAGATGATCAGAACAGAGACCATCGTGAGGAGGACAAGCGGGAGCTCAACCAGTTTACAGAACATGAGAATGACCTGCCGGCTGACCTGGAGCCAAGTCCACAGGTGAATTGGGTAGACCAGGCTGGGAGCGATGCTAGGAACACTGATGGAGAGGAGCTGTATGAGGAGACTCTCATGCAACTGCACTCCAACCTCATTTATGACACGCTTCCCCGAATCCGCCGCAACACCAAGGGTGACCCCTGTAAGAAGAACCCTCTCTATGTGGAGTTTAAGGACATTGGCTGGGATACTTGGGTCATACAGCCCCTGGGCTATGAAGCCTATGAGTGCAATGGTGTATGCAGCTACCCCATGACCTCTGAGGTCTCGCCTACCAAGCACGCCATTGTCCAGAGTCGGCTGAGCAGTAAGATTCCACAGAAGGCGTCACCAGCCTGCTGTGTTCCCACCAAGCTAGAGCCCATCTCACTCCTTTATGTCGAGGACGGAGGAGTGGTCACCTACATGCACAAGTACGAGGGCATGGTGGTGTCAGAATGCGGCTGTAGATAATCATAGAACTGACTGTAGGTTcaggagagaggtatagagactgTGGATTAACGTAGACTGAGTGGTCATCAATTTCACTATCAAGAAGAAAATCAGATCAAAAGTGCCTATTTGAAAATAATACATTTCTGCAATCATTAAGGATACTTGCTTTGTGAGCTATTAGCAGACATATAGTGTAAACAGAATGCATACAGTAAACCATATTAAGGACATGAATCATTTCTATATCTATATTTTGCAGCATCAACTACATTGTATGACAAAGATAAACAGTGGAGGCGTAAATAGGAAGATGACAGAGCAAGAGGGTCCTGCCTGTATGTGCATTCAATTATGTACATTTGCCATTTGTAAAAGTACATTTCTTATTATATTGAGATTATATAAATGCTATTTTACAATGCCAgcaatataattatttttttttaagaaaaaaaaagtgaaatgtgAATATCATGCTGTTCTTTGTAGTTTGTGATCATACATTTGACTTTCATTTTGGCGATATTGGTATGTACCGTCAGATATACACAAAACCTTGTTGGTTTAAGTAGCTCTTGGTTTAAATGGTTGGTCCTGTATGGCTTAGTTGGTAGAGTATGGCGCTTACCAGGTCAgtattgtgggtttgattcctgtgtccacccatatgtaaaatgtatgcacgcatgactctTAAgtcgtgtctgctaaatggcatatatt

Function

NR:

description
bone morphogenetic protein 10-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021622969.2 False 2296 mRNA 0.48 2 19866332 19869191
XM_021622970.2 True 2131 mRNA 0.48 2 19866332 19869191
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Neighbor

gene id symbol gene type direction distance location
LOC110536813 LOC106568177 coding upstream 14037 19847408 ~ 19852295 (+)
LOC110537150 LOC106568245 coding upstream 45324 19790016 ~ 19821008 (+)
LOC110536812 LOC106568176 coding upstream 96787 19748041 ~ 19769545 (+)
LOC110536811 LOC106563918 coding upstream 121160 19726164 ~ 19745172 (+)
LOC110537148 LOC106568173 coding upstream 154869 19645967 ~ 19711463 (+)
LOC110537152 LOC106568180 coding downstream 3283 19872474 ~ 19892580 (+)
LOC118937812 NA coding downstream 151846 20021037 ~ 20026169 (+)
LOC110537154 LOC106568183 coding downstream 238155 20107346 ~ 20370543 (+)
LOC110537158 LOC106568186 coding downstream 798766 20667957 ~ 20694090 (+)
LOC118937641 NA coding downstream 926923 20796080 ~ 20801052 (+)
G1046467 NA non-coding upstream 1633 19864478 ~ 19864699 (+)
G1046437 NA non-coding upstream 22671 19843036 ~ 19843661 (+)
G1046424 NA non-coding upstream 40130 19825913 ~ 19826202 (+)
G1046423 NA non-coding upstream 40653 19825323 ~ 19825679 (+)
G1046478 NA non-coding downstream 18520 19887711 ~ 19887941 (+)
G1046500 NA non-coding downstream 70270 19939461 ~ 19942115 (+)
G1046473 NA non-coding downstream 78120 19947311 ~ 19950714 (+)
G1046614 NA non-coding downstream 124331 19993522 ~ 19993729 (+)
G1045418 NA other upstream 900390 18965568 ~ 18965942 (+)
G1044317 NA other upstream 1472991 18392646 ~ 18393341 (+)
G1044265 NA other upstream 1569930 18295930 ~ 18296402 (+)
G1044201 NA other upstream 1789032 18075802 ~ 18077300 (+)
G1044056 NA other upstream 1978415 17886653 ~ 17887917 (+)
G1046724 NA other downstream 274988 20144179 ~ 20147414 (+)
G1046823 NA other downstream 413695 20282886 ~ 20293851 (+)
G1046929 NA other downstream 640078 20509269 ~ 20511519 (+)
G1048417 LOC106568221 other downstream 1963903 21833094 ~ 21834812 (+)

Expression

LOC110537151(LOC106568178) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 15.
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LOC110537151(LOC106568178) Expression in each Bioproject

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LOC110537151(LOC106568178) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
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Co-expression Network