LOC118937643


Basic Information

Item Value
gene id LOC118937643
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 21446041 ~ 21465637 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005034910.1
ctgtgcGGGTTTTCCTTTTGTGGGTAGGAATTTGAGCagaaatatccacaggaaagtaatAAAGTATTATTAAACTGACTTTCCAAACACTGGTACCTCCATTGATATTTATATCCCCTGGCACATGCGCAAAACAATGTAAACAAACGTCTACAGGAGGCCTCTAGGCAAGTATGCATGCATTGCCTGCGCATGCTGCAGGTGATCTGAACGCACTACCAGGCTTTTAAAAGTTAGTTGAATTATACTTTCATGTGAATATTGTCTCAAATTCCGAACTATACAAGAACCAACCCGACAGACAATCAGCAGAGGGTCAAAGacaggaagtagagagagggagagagtgggcaGGGAGAGGACGAACAGGTCATCAGGGGCCAGAGACACGcagcagagagaggtagagggagaacacaACCCATGTTGAAGCAAGGAGAGGACGAACAGGACATCAGAAAGGAGCTTTAGtgccctcaggaggttgaagacGTGGCTGCGCTCAACAATGACAAAGCAGACCATGTTGCTTTCTGTCATATTCACCAGGAGAAGCTGGATAGCATAGATATGAAAACAATATGCCAGAATGTTATTGCTGCCAGTGACAGGCGTAAAATGGTATTGTTGCATTTAAGTTAATTGAGACTGAAGATCTGACCCCTCTATGTACCATGTATAAGGTTGCAACCGGTTATTGACTGTTATTGAATGTGTATGTTTTTTCACTTGATGGTGAATGACAATGAGCTGTTGCTATGTCTTTTTTACATCTATTTCTTGAGCTTGATGCCATATTGATTAGTTTATTTTGAAGTCTATTTTCCTATAGCATTTTATTCCATATTGAATAATTATATTTTGAATGGCACTGAATTATTTTATGAATTAAATACTACAATTAAATTGTGTA

Function

NR:

description
PREDICTED: uncharacterized protein LOC109615379

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005034910.1 True 913 mRNA 0.40 4 21446041 21465637

Neighbor

gene id symbol gene type direction distance location
LOC110537173 LOC106568261 coding downstream 85586 21333045 ~ 21360455 (-)
LOC110537172 NA coding downstream 133383 21311912 ~ 21312861 (-)
LOC110537170 LOC106568196 coding downstream 157538 21273895 ~ 21288503 (-)
LOC110539129 NA coding downstream 216701 21227020 ~ 21229340 (-)
LOC110537169 LOC106568195 coding downstream 233884 21164599 ~ 21212157 (-)
LOC110537176 LOC106568262 coding upstream 19194 21484831 ~ 21486628 (-)
LOC110537177 LOC106568210 coding upstream 29625 21495262 ~ 21501995 (-)
LOC110539130 LOC106568216 coding upstream 57877 21523514 ~ 21524891 (-)
LOC110537178 susd2 coding upstream 60730 21526367 ~ 21544494 (-)
LOC110536817 LOC106568205 coding upstream 94232 21559869 ~ 21582291 (-)
G1048018 NA non-coding downstream 233483 21130153 ~ 21212558 (-)
G1047961 NA non-coding downstream 318483 21127230 ~ 21127558 (-)
G1047896 NA non-coding downstream 391348 21053898 ~ 21054693 (-)
G1047775 NA non-coding downstream 440365 21005454 ~ 21005676 (-)
G1048776 NA non-coding upstream 28078 21493715 ~ 21493950 (-)
G1048820 NA non-coding upstream 125414 21591051 ~ 21592576 (-)
G1048818 NA non-coding upstream 133156 21598793 ~ 21599461 (-)
G1048834 LOC106568202 non-coding upstream 151562 21617199 ~ 21617498 (-)
cry5 LOC106568206 non-coding upstream 180181 21645814 ~ 21655245 (-)
LOC110537166 srsf9 other downstream 509140 20933954 ~ 20938307 (-)
LOC110537162 LOC106568189 other downstream 579960 20862558 ~ 20888980 (-)
G1047473 NA other downstream 744001 20701540 ~ 20702040 (-)
LOC110537156 LOC106568185 other downstream 846614 20488123 ~ 20599476 (-)
G1047325 NA other downstream 949613 20495565 ~ 20496428 (-)
G1048931 NA other upstream 319554 21785191 ~ 21785557 (-)
G1048983 NA other upstream 423901 21889538 ~ 21889869 (-)
G1049013 LOC106568226 other upstream 465546 21931183 ~ 21931785 (-)
G1048996 NA other upstream 471694 21937331 ~ 21938200 (-)
G1048995 NA other upstream 472809 21938446 ~ 21942996 (-)

Expression


Co-expression Network