Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110537179 |
| gene name | LOC106568202 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 21598765 ~ 21626234 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| autism susceptibility gene 2 protein-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021623018.2 | False | 4714 | mRNA | 0.50 | 19 | 21598765 | 21626234 |
| XM_021623019.2 | False | 4711 | mRNA | 0.50 | 19 | 21598765 | 21626234 |
| XM_021623020.2 | False | 4642 | mRNA | 0.50 | 18 | 21598765 | 21626234 |
| XM_036937186.1 | True | 4711 | mRNA | 0.50 | 19 | 21598765 | 21626234 |
21,584,000
21,588,000
21,592,000
21,596,000
21,600,000
21,604,000
21,608,000
21,612,000
21,612,000
21,616,000
21,620,000
21,624,000
21,628,000
21,632,000
21,636,000
21,640,000
NC_048576.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536816 | myhz2 | coding | upstream | 81949 | 21510489 ~ 21516816 (+) |
| LOC110537175 | LOC106568200 | coding | upstream | 117649 | 21464547 ~ 21481116 (+) |
| LOC110537171 | LOC106568197 | coding | upstream | 300362 | 21289084 ~ 21298403 (+) |
| LOC110537168 | LOC106568260 | coding | upstream | 634298 | 20961503 ~ 20964467 (+) |
| LOC110537167 | LOC106568193 | coding | upstream | 664899 | 20932536 ~ 20933866 (+) |
| foxred1 | foxred1 | coding | downstream | 2063 | 21628297 ~ 21643733 (+) |
| LOC110537183 | LOC105014907 | coding | downstream | 29158 | 21655392 ~ 21666107 (+) |
| LOC110537185 | LOC106568207 | coding | downstream | 59124 | 21685358 ~ 21692839 (+) |
| LOC110537186 | LOC106568203 | coding | downstream | 72528 | 21698762 ~ 21722433 (+) |
| LOC110537187 | LOC106568201 | coding | downstream | 104072 | 21730306 ~ 21752514 (+) |
| G1048325 | NA | non-coding | upstream | 4338 | 21594115 ~ 21594427 (+) |
| G1048259 | NA | non-coding | upstream | 93406 | 21505083 ~ 21505359 (+) |
| G1048257 | NA | non-coding | upstream | 96109 | 21502252 ~ 21502656 (+) |
| G1048256 | NA | non-coding | upstream | 105000 | 21493536 ~ 21493765 (+) |
| G1048253 | NA | non-coding | upstream | 106745 | 21491807 ~ 21492020 (+) |
| G1048275 | NA | non-coding | downstream | 394 | 21626628 ~ 21626969 (+) |
| G1048350 | NA | non-coding | downstream | 48308 | 21674542 ~ 21674800 (+) |
| G1048363 | NA | non-coding | downstream | 75884 | 21702118 ~ 21702698 (+) |
| G1048382 | NA | non-coding | downstream | 90532 | 21716766 ~ 21716988 (+) |
| G1048384 | NA | non-coding | downstream | 92858 | 21719092 ~ 21719316 (+) |
| LOC110537158 | LOC106568186 | other | upstream | 907023 | 20667957 ~ 20694090 (+) |
| G1046929 | NA | other | upstream | 1087246 | 20509269 ~ 20511519 (+) |
| G1046823 | NA | other | upstream | 1304914 | 20282886 ~ 20293851 (+) |
| G1046724 | NA | other | upstream | 1451351 | 20144179 ~ 20147414 (+) |
| G1045418 | NA | other | upstream | 2632823 | 18965568 ~ 18965942 (+) |
| G1048417 | LOC106568221 | other | downstream | 206860 | 21833094 ~ 21834812 (+) |
| G1049502 | NA | other | downstream | 899707 | 22525941 ~ 22526232 (+) |
| G1049629 | LOC106456187 | other | downstream | 1102696 | 22728930 ~ 22737666 (+) |
| G1051534 | NA | other | downstream | 2551196 | 24177430 ~ 24177934 (+) |
| LOC110537258 | msi2h | other | downstream | 3726350 | 25352530 ~ 25719607 (+) |
