Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118937645 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 21729670 ~ 21735445 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005034912.1 | True | 363 | mRNA | 0.43 | 2 | 21729670 | 21735445 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937644 | LOC106564323 | coding | downstream | 60203 | 21667423 ~ 21669467 (-) |
| cry5 | LOC106568206 | coding | downstream | 74425 | 21645814 ~ 21655245 (-) |
| LOC110536817 | LOC106568205 | coding | downstream | 147379 | 21559869 ~ 21582291 (-) |
| LOC110537178 | susd2 | coding | downstream | 185176 | 21526367 ~ 21544494 (-) |
| LOC110539130 | LOC106568216 | coding | downstream | 204779 | 21523514 ~ 21524891 (-) |
| iscua | iscua | coding | upstream | 30582 | 21766027 ~ 21768958 (-) |
| LOC110537191 | LOC106568213 | coding | upstream | 42424 | 21777869 ~ 21780448 (-) |
| LOC110537196 | LOC106568212 | coding | upstream | 69248 | 21804693 ~ 21805631 (-) |
| LOC110537198 | LOC106568221 | coding | upstream | 93713 | 21829158 ~ 21852005 (-) |
| LOC110537200 | LOC106568223 | coding | upstream | 129253 | 21864698 ~ 21872628 (-) |
| G1048910 | NA | non-coding | downstream | 2273 | 21727190 ~ 21727397 (-) |
| G1048908 | LOC106568203 | non-coding | downstream | 8906 | 21720128 ~ 21720764 (-) |
| G1048906 | NA | non-coding | downstream | 10588 | 21718835 ~ 21719082 (-) |
| G1048904 | NA | non-coding | downstream | 13628 | 21715837 ~ 21716042 (-) |
| G1048903 | ssh1 | non-coding | downstream | 13885 | 21715390 ~ 21715785 (-) |
| G1048932 | NA | non-coding | upstream | 50954 | 21786399 ~ 21786618 (-) |
| G1048965 | dgcr2 | non-coding | upstream | 84272 | 21819717 ~ 21821054 (-) |
| G1048883 | NA | non-coding | upstream | 92077 | 21827522 ~ 21828763 (-) |
| LOC110537166 | srsf9 | other | downstream | 792769 | 20933954 ~ 20938307 (-) |
| LOC110537162 | LOC106568189 | other | downstream | 863589 | 20862558 ~ 20888980 (-) |
| G1047473 | NA | other | downstream | 1027630 | 20701540 ~ 20702040 (-) |
| LOC110537156 | LOC106568185 | other | downstream | 1130243 | 20488123 ~ 20599476 (-) |
| G1047325 | NA | other | downstream | 1233242 | 20495565 ~ 20496428 (-) |
| G1048931 | NA | other | upstream | 49746 | 21785191 ~ 21785557 (-) |
| G1048983 | NA | other | upstream | 154093 | 21889538 ~ 21889869 (-) |
| G1049013 | LOC106568226 | other | upstream | 195738 | 21931183 ~ 21931785 (-) |
| G1048996 | NA | other | upstream | 201886 | 21937331 ~ 21938200 (-) |
| G1048995 | NA | other | upstream | 203001 | 21938446 ~ 21942996 (-) |
