LOC110537189 (LOC106568211)


Basic Information

Item Value
gene id LOC110537189
gene name LOC106568211
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 21755294 ~ 21758765 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021623036.2
CCTGTTTCTTCATATCAGGTAGAGAGCTCTGTTGTGCCTCTACCATCAGCTCGTCAAGGCATGCCAGCATGTGCTTAACTCCAGGATCACCAATTTGAGCCTCCTATCCTTCCACGACTTCTACTACACTTCCCCATCAGTGAGAGTTGGCACCATGATGTCATGGTATAACAAGGTGTATCCTGTTCTGTTATGGAGCCTGTTTCTGTTGTATTCTGAGGGATCTCAGAACTTCACACTCACAGAAGACAGAGGCAGTAACATGAGCATCGCTACAGCAGTAACACAAAAGAGCAGTTCGTCTATGGTGGAAACCCATACGGTGATGTACAACAGCAGTACCCGTGAGGTAGGCGGTGCCATTACTGTGGGTGTTAACGCCTCAGAGGCAACCATGATGACCAGCTTGGGTCCAACCCTTTCTCCCTTAGCAATGCTCACTTCATCAGGTACAACCCCATCTCCCCTCACCACCAACCAACCCACCAGCCAGACGTCCTCTTCCCATGGGCCATCTAGCACATCTGACCTCTTGTCCACCACCACTCCCAGCTCTACCATCTGGTCCTCCATCACAGAACTTAACACCACATCTGAGGTGTCCTCCACCACTGggccctcctccatctctggaCCTTTCTCCAACAATGTCTCAACCTCCACCCCAGGGCCTAGCTCTACCATTGTCTCATCCTCCACCCCAGGGCCTAGCTCTACCATTGTCTCATCCTCCACCCCAGGACCTAGCTCTACCATTGTCTCATCCTCCACCCCAGGGCCTAGCTCTACCATTGTCTCATCCTCCACCCCAGGGCCTAGCTCTACCATTGTCTCATCCTCCACCCCAGGGCCTAGCTCTACCATTGTCTCATCCTCCACCCCTGGGCCTAGCTCTACCATTGTCTCATCCTCCACCCCAGGGCCTAGCTCTACCATTGTCTCATCCTCCACCCCAGGGCCTAGCTCTACCAATTTCTCATCCTCCACCAATGAGACTTTCTTAACCACTTTTCCACCCATCTCAACCTCTGACAATTCTACCAACTCCTCTTCTGGGGTCCTGATTCCCAAGATAATAACAGAGAAGGTCCCCATCTTGATCACCAAGACAACGACCACCATGACAACGTTACCTTCTAAAAAAGATCCATCAGGGGGAGGGGGTCTGCCCTGCTCTCCTACCCGACGGGATGGTCTGGTGAGCCAGTGTCTGATTGCCATTGCCTCCCTGGCTGCAGTGGCCACCTTCTTCATGGTCAGCTGCATCATCCTCTGCACCAAGTACTCCTCCAGGAAGCATCGCTACAGAGTGGGCACAAACAATCGGGGCACTGAGATGGTGTGTATCTCTGCCCTGCTCCATGATGACAATGGTTCCCATTGGAGACCCCACATCCCCAAGAGCAACGGAGCCCTGCTGCCTGGAACAGAGTTGGATAGTGACGAGGAGGGGGGAGATGATGTAACCCTCCACAGCTTCCTCCCAGACAATGAGCAACGAATCTAGAGTGTAGATATGCAGACTGTGTCAGACTCTGTGAAGTGCTATATGGTCCAATTACACAGGGTACACAACTCCAGGCCTGAAGGTTAATGGTCATCGCAGCCATCTTAAAGTTCATCAAGGGAAAGGATTAAAAACAGAGACTGTGGGGGCGTATAAAACCTTTGTAGTTTGCCTACTTACTCTGGGTTAAACAACCACTTTTCTTCAATTGATGAGACTTTGAATTGTACATCTGACTGGTCGACTGCTGTCAATATACAAACTGTTGCTCTTAGAATATATTTTAGCGTCCTCTTTGAAGTTGTTGGTTGGGCCTCGCTGCACATCCATCTACTGCAACCagtagaggaagagacagaaaccACAAATGGAGAACCAATGATACGTTACTTTATTGTGACATGTTTACAGCAAACAGCAGTGACAAAGTTTGGAGAAGTCAGGTGGTCAATCATCCTCAAACGTAACGCAACCCAATGCAGCCTCTGAGTAGTTCTGAGTGAGATTGAGTTTTTGCACCATTGCACTGACATGATTCTGTTGATAATGAAGTTCACCTAATAGGAAGAGAAcagtgatgtaaaaaaaaaaaaaggtttgctACACAGACAGTTTATTGGAGAGATTTAGGATTCTACAATTGATTTATGGATCTGGAAGTAAAGTTCATGTTATTTTTTAAGAGAATCGTTCCTGCACATACACACTTATAGAGCTATAAGAAAACCCAGACTGCTTATGATGACTCACTGTTCGTTTGGTCACTGGGTGGATGGGGATATTTAGAGCTCTATGTGGTCAGAATCTTATAGCCTTCAACGTTCTGTGGAAATACAtgatacaaaaaaacaaaaaacatcattattttattttattacatgCTTCAGAAAATATgtatccttgtgagcaatttcatTTATTTGTTTTCTGCAAAAAAGCTTGTTCTTCTGGAAGACTTGTTAGGTCTTGATAACAAAACCATCTGCCTTGATGTACAGTGAGCCAAAACATAGACTGTATGAAGTATATCAAAATATGGTCAGGGTCAAGCGAATGTGAGATGTGATGAAATGTCCTTTACAGGGTGTTAAATAAGTCTGTAACCTTCTGTATTGAGTGTCTGTGTAGACAGTTCCAGACGTTCGGCAGATGTTTCTTGTGTCCTTGTCTTGCCATGATATGTCATAATACAAAGATACAGTATCATTGCTAATCCCAGACCCCCTTCAAGCCCTCAGATGTTTGACTTCTTTTTGACTTTTTGGGGTTTTCCCTCCGTGTGAGAGAGGGACAGGTTTCCTAGAGTCCAGTCAAACACAATGAAGAGGCTCCACAATTTAACGGAAAATTGATCACAAAGGACTGGAACAAATTAATAGATCATAACGAAACTGTAAAGAAATGACAAAGTGATATTAAACAACGAGCAGCTGGCTAA

Function

NR:

description
uncharacterized threonine-rich GPI-anchored glycoprotein PJ4664.02-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021623036.2 True 2945 mRNA 0.46 2 21755294 21758765

Neighbor

gene id symbol gene type direction distance location
LOC110537187 LOC106568201 coding upstream 2780 21730306 ~ 21752514 (+)
LOC110537186 LOC106568203 coding upstream 32861 21698762 ~ 21722433 (+)
LOC110537185 LOC106568207 coding upstream 62455 21685358 ~ 21692839 (+)
LOC110537183 LOC105014907 coding upstream 89187 21655392 ~ 21666107 (+)
foxred1 foxred1 coding upstream 111561 21628297 ~ 21643733 (+)
LOC110537190 iscua coding downstream 2116 21760881 ~ 21768970 (+)
LOC110537192 LOC106568218 coding downstream 15669 21774434 ~ 21777732 (+)
LOC110537195 LOC106568209 coding downstream 37580 21796345 ~ 21805989 (+)
LOC110537193 idd coding downstream 47434 21806199 ~ 21826261 (+)
LOC110537199 LOC106568222 coding downstream 93353 21851548 ~ 21862294 (+)
G1048388 NA non-coding upstream 21521 21733555 ~ 21733773 (+)
G1048268 NA non-coding upstream 28846 21723297 ~ 21726448 (+)
G1048385 NA non-coding upstream 35554 21719416 ~ 21719740 (+)
G1048384 NA non-coding upstream 35978 21719092 ~ 21719316 (+)
G1048382 NA non-coding upstream 38306 21716766 ~ 21716988 (+)
G1048399 NA non-coding downstream 11321 21770086 ~ 21770287 (+)
G1048407 NA non-coding downstream 27077 21785842 ~ 21786052 (+)
G1048377 NA non-coding downstream 68948 21827713 ~ 21828270 (+)
G1048419 LOC106568221 non-coding downstream 76961 21835726 ~ 21835994 (+)
LOC110537158 LOC106568186 other upstream 1063552 20667957 ~ 20694090 (+)
G1046929 NA other upstream 1243775 20509269 ~ 20511519 (+)
G1046823 NA other upstream 1461443 20282886 ~ 20293851 (+)
G1046724 NA other upstream 1607880 20144179 ~ 20147414 (+)
G1045418 NA other upstream 2789352 18965568 ~ 18965942 (+)
G1048417 LOC106568221 other downstream 74329 21833094 ~ 21834812 (+)
G1049502 NA other downstream 767176 22525941 ~ 22526232 (+)
G1049629 LOC106456187 other downstream 970165 22728930 ~ 22737666 (+)
G1051534 NA other downstream 2418665 24177430 ~ 24177934 (+)
LOC110537258 msi2h other downstream 3593819 25352530 ~ 25719607 (+)

Expression


Co-expression Network