LOC110537211 (LOC100136462)


Basic Information

Item Value
gene id LOC110537211
gene name LOC100136462
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 22215403 ~ 22226944 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021623078.2
CCAGGGCTCCCTACTGCTGTGTAGTTAATCGGTTACAGTATGGAAGGCAGTGGCACTGGATGGACTGGAGGTCTGCTGCCCTCTGTAGGCGAAGAGGCAACTAAGGAGCACTCAGTCTTTGAGGTGGCTGTCCAGAACGGCTTGGCCAACCACAGCTCCCTGTTTGCAGACGTGGTTCTGCTGCAGAGCTTCAAGCTGCTCATCATCCCATGCTAcgccctggtggtggtggtgggtgtttTGGGGAACTACTTGCTGCTCTACGTCATCTGCCGCACCCGCAAGATGCACAATGTCTCCAACTTCTTCATCGGGAATCTGGCCTTCTCAGACATGCTGATGTGTGTGACCTGTGTACCATTCACCCTGGCCTATGCCTTCAACCCCCGTGGCTGGGTGTTTGGAAGGTTTATGTGCTACCTGGTGTTCCTGATCCAGCCAGTCACAGTTTACGTGTCTGTCTTCACCCTCACCGCCATTGCTGTCGACAGGTACTATGCCACTGTGCATCCTCTGAAGAAGCGCACCTCGGTGGCCACCTGTGCCTATGTGCTGTCAGGGATCTGGCTGCTGTCCTGTGGTTTGGTGGCTCCAGCTGTGGCCCACACCTACCATGTGGAATTCAGAGAGGAGGGCCTCACCATCTGTGAGGAGTTCTGGCTGGGGCAGGAGAAGGAGAGGCTAGCCTACGCCTACAGCACCTTGCTGGTTACCTACGTCCTGCCACTCTCTGCCGTCTGTGTCTCCTACCTCTGCATCTCTGTCAAGCTGAGGAACTGTGTGGCACCGGGACATCGGACCCGGGACCAGGCAGAGGCACAGCGAGCCCGGAAGCGGAAGATCTTCCGTCTGGTTGCGCTGGTTGTGGCGGCCTTTGGGGTGTGCTGGCTGCCCATTCACGTGTTCAACATACTGCGTGACATCGACATCCGCCTCATCAACAAGCGCCACTTCCTGCTCATCCAACTAATGTGCCATCTGTGTGCCATGAGCTCATCCTGTTGTAACCCCTTCCTGTACGCCTGGCTGCACGACCGTTTCCGCGCCGAACTGAGGAAGATGTTCACCTGCCACCGTCGCATCGGCATCCCTGCCAACCACTGTGCGACAGCCAGCGTGGCCCTGTGACTGTGCAGGgacaaggagagagaagagacagaagatctCTGATACCAGTGTAAACATGTTATAGGTCCAATTTTCTGATTATTTACTATTGACTTAATGTGGATATGACAAGAGTTATTTGTGAATTACAGCTGATAACAGAGATATTAGGTGGTTCCCTAgtaattttcgatgaacaaatcaATTGAACATGCATGAGGCGATTGCCTGGAAAGAATGAATGAACTGATTGAATGCCAATAATATGAAGGTAACACAAGAGAGAAAAAAGCAAGAGAAAGAAtaaagggagagggaaggagagggagaaagaggaggcgaGGTGACAGTACCACCAAACAAATGTTATTTGGAAGGCCATTATGCACAGCCACAGTCAATGTTTAACACCAGGATACATCAGCAAGCAGGAGATTCATCTGCCAAAAATTTGAGGTTTGGTAGATAATTTCAAGGCAGCTAAGCACTGTTCACACAATTGTTGCTTCTACATACGCGATATCCCCCATAACTCCAGGTGGACAGTTGTCTGCTGAGGTTAGAGGGTAGaagttgtcccacctagctatcgtAAGATTAATGCACTAACTGTAGGTCGCTCTGGATGAGAGCGTCTgcgaaatgactaaaatgtcaatgtaaatagtcaatGCAGGTTTGGTCCCCAGATTGGTGTTTGGCAGTGGATGACATGCTTAGTGACATGAATACAGATATAATCTCGGTCTCCACTCTGTGAATAAACATGCTTAATAAAACAGTAGGTGGTGTTTGTTCCCCCATGGTTACATCCCTATTTTTATTGCAGTTTTATCAGTCTGTTACCCATCTTTGTCTCTGGGGAACGTACACCGCTTCTGAAAATAGTCATTTAGAATTGTTTGctacccgagtggcgcagcggtcaaaGGCACTGTATCGCGGTATTGCGGCATCACTACTGCCAGGGTTatatcccaggctgtgtcacaatcgGTCGTGaccgcctgcaggctgacttcggttgtcagttgaacggtgtttcctccgacacattggtgcaactggcttccgggttaagcgagcgggtGTTTAGAAGCGCGgttttggcgggtcatgtttcggaggacgtatgactcgacctttgcctcccCCTAGCCCGTTGTGGAGTTGCATATCACGAAAAAGGGTATAAAATTTGAAAAAACTCAAATGTAATTAGGTGTTTGTTAGGCATTTGCTGAGGTCATGCTTCCCACCTCATGCTTGCATTAATGACTGCATTATAGTTTAACTGAGGTGTTGATTCTTATTGGTTTTTTAGACCAACCACAAAAAACCTTCCCCACTTTCAATACATTTAGTGAAATGTCATGGTGCCTAATAAATGGCCTTCTGTGGTTTGTGTCATGCCATATAAAATGTCTGTCCTTAAGTGATTGCATGCAATTATGTGTAAAATTCTGAATAAACAAACACTGAGAATTGGCCAATTGCTGATTGAAAAAAAAGCTAATAAGCTTAATGTATTACAGATGGCAAATGTCTTAAATCATTAAAAACTGAA
>TU1195617
GGAGTTCACTTCACCTTTTGCTCACTGCACTTGAAGTACCACGTCTTTGATCAAATATATCTGTTTCTTTCATTTTTGAAGAATTGCAGCTTTCGTTTTTACTTCATTAGCAAGCTGCTAAGTGGCTGGTACCCAGGGCTCCCTACTGCTGTGTAGTTAATCGGTTACAGTATGGAAGGCAGTGGCACTGGATGGACTGGAG

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004983 neuropeptide Y receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021623078.2 False 2674 mRNA 0.48 2 22215403 22218257
TU1195617 True 202 lncRNA 0.44 2 22218188 22226944

Neighbor

gene id symbol gene type direction distance location
LOC110537206 LOC106568231 coding downstream 164689 22039142 ~ 22050714 (-)
LOC110537205 LOC106568229 coding downstream 193436 21977346 ~ 22021967 (-)
LOC110537202 LOC106568228 coding downstream 248738 21943154 ~ 21966665 (-)
LOC110537204 LOC106568227 coding downstream 314542 21897104 ~ 21900861 (-)
LOC110537200 LOC106568223 coding downstream 342775 21864698 ~ 21872628 (-)
LOC110537212 LOC106568263 coding upstream 49074 22267331 ~ 22270536 (-)
LOC110537213 LOC106568236 coding upstream 53784 22272041 ~ 22293724 (-)
LOC110537215 LOC105014916 coding upstream 143522 22361779 ~ 22398985 (-)
LOC118937646 NA coding upstream 249139 22467396 ~ 22477003 (-)
LOC110537217 LOC106568238 coding upstream 270948 22489205 ~ 22494114 (-)
G1049089 NA non-coding downstream 36761 22113948 ~ 22178642 (-)
G1049095 NA non-coding downstream 75423 22081827 ~ 22139980 (-)
G1049107 NA non-coding downstream 108568 22101885 ~ 22106835 (-)
G1049040 NA non-coding downstream 213934 21982509 ~ 22001469 (-)
G1048998 NA non-coding downstream 278201 21936952 ~ 21937202 (-)
G1049212 NA non-coding upstream 36718 22254975 ~ 22255196 (-)
G1049366 NA non-coding upstream 86344 22304601 ~ 22304982 (-)
G1049425 NA non-coding upstream 220996 22439253 ~ 22439739 (-)
G1049428 NA non-coding upstream 223963 22442220 ~ 22442447 (-)
G1049429 NA non-coding upstream 225233 22443490 ~ 22443911 (-)
G1048995 NA other downstream 272407 21938446 ~ 21942996 (-)
G1048996 NA other downstream 277203 21937331 ~ 21938200 (-)
G1049013 LOC106568226 other downstream 283618 21931183 ~ 21931785 (-)
G1048983 NA other downstream 325534 21889538 ~ 21889869 (-)
G1049389 NA other upstream 118829 22337086 ~ 22340509 (-)
LOC110537218 LOC106568105 other upstream 325921 22540032 ~ 22546807 (-)
LOC110536820 LOC106603249 other upstream 389604 22607858 ~ 22654480 (-)
G1049722 NA other upstream 470904 22689161 ~ 22689597 (-)
G1050429 NA other upstream 1025380 23243637 ~ 23244270 (-)

Expression


Co-expression Network