LOC110536825 (LOC106603276)


Basic Information

Item Value
gene id LOC110536825
gene name LOC106603276
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 24727999 ~ 24730374 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110536825
ATGCTACCTTTATTAGTTGCAGCTGGTGTAGTTGCATTGTACATTCTCTTTGTTGAAACTATTTTCAAAAGCTCAAAATGTAAAGCAAATGCAGTGATGGCAGGGAAGACTGTAATAATAACAGGTGTGAACACTGGCATTGGAAAAGCCACTGCTATGGAGCTTGCCAGGAGGGTTGCAAGAGTAATCCTGGCATGGCACATCCAAAAGAAAGCTGAACTTGCTATAAGTGATATAAAAAGGAAGACGGGCAACACTGATGTGGTGTACATGCAGTTAGACCTGGGGAGCCTCCAGGCAGTGCATTCTTTCACTGAGACCTTCCTGAAGACAGAGGCTAGATGGGATCTGCTCATTAACAGTGGTCTGGTGGTGGATGGGCGCACTGCTGATGGCTTTGCTATTGAGTTTGGGGTCAACCACCTCGGCCACTTTCTGCTGACCTGTCTTTTGCTGGACCACCTGAAGGAGGGCACTTAGGGCCATGTAGTCACACTGGGCTCCATGGCATATTGCTGGGGAAACATTGACTTTGATGCCCTTGTCACTAATAAACACCTGGGCACCGGGAGGTACAGCAGGCAGTTCTTCCACTCTTACTGCTAAAGCAAACTGTGCAACATTCTCTTCAACCACGAGCTGGCCAAGAGGCTGAAGGGTACCAATGTCACTTGCTACAGTGTTCATGTAGGAGTAGTGAAAACGGAGCTACCCCGAAACTGCAGCTTGTGGCAGAAATTCATAATCAAGCCAATAGCCAGACTGTTGTTCCTGGATCCAGAATCCGGTGTCCAGACTACACTCCACTGTGACCTCCAGGATGGCATTGAGCCCCTGAGCAGACATTACTTCTTCTGCTGTGCACCGGAGGACGTGCAGGATGTGGTTGCCAAAGGCAAAAACTGCGTTGTCGCTAAGAAGTTATGGAAGTTCATGTGGCCTGTTTTAAGGTGGCTGAGTGGCCTGTTTTAA

Function

NR:

description
PREDICTED: dehydrogenase/reductase SDR family member 13-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110536825 True 972 mRNA 0.48 5 24727999 24730374

Neighbor

gene id symbol gene type direction distance location
mrm1 mrm1 coding downstream 2603 24720384 ~ 24725396 (-)
LOC110537240 lhx1 coding downstream 104587 24617118 ~ 24623412 (-)
LOC110537239 aatf coding downstream 110883 24608246 ~ 24617116 (-)
LOC118936414 NA coding downstream 120447 24600309 ~ 24607820 (-)
LOC110537235 LOC106568090 coding downstream 605938 24095480 ~ 24122061 (-)
LOC100301685 rdh12 coding upstream 4537 24734911 ~ 24737099 (-)
LOC110537242 LOC106568081 coding upstream 7498 24737872 ~ 24746999 (-)
LOC110537244 LOC106568079 coding upstream 21232 24751606 ~ 24978957 (-)
LOC110537246 LOC106568078 coding upstream 306454 25036828 ~ 25142397 (-)
LOC110536826 LOC106568076 coding upstream 416815 25147189 ~ 25151399 (-)
G1052118 NA non-coding downstream 91923 24635777 ~ 24636076 (-)
G1052113 NA non-coding downstream 94381 24630737 ~ 24633618 (-)
G1053682 NA non-coding upstream 118638 24849012 ~ 24851195 (-)
G1053709 NA non-coding upstream 164536 24894910 ~ 24895331 (-)
G1053733 NA non-coding upstream 194200 24924574 ~ 24947891 (-)
G1053815 NA non-coding upstream 309724 25040098 ~ 25040375 (-)
G1052040 acaca other downstream 172999 24554697 ~ 24555000 (-)
G1050429 NA other downstream 1483729 23243637 ~ 23244270 (-)
G1049722 NA other downstream 2038402 22689161 ~ 22689597 (-)
LOC110536820 LOC106603249 other downstream 2086400 22607858 ~ 22654480 (-)
G1054211 NA other upstream 893505 25623879 ~ 25624637 (-)
G1054232 NA other upstream 926895 25657269 ~ 25659005 (-)
G1055010 NA other upstream 2250409 26980783 ~ 26982355 (-)
G1055199 NA other upstream 2414836 27145210 ~ 27145493 (-)
G1056225 NA other upstream 3247652 27978026 ~ 27978436 (-)

Expression


Co-expression Network