Item | Value |
---|---|
gene id | LOC110537244 |
gene name | LOC106568079 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048576.1 |
NCBI id | CM023230.2 |
chromosome length | 102853256 |
location | 24751606 ~ 24978957 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
seizure protein 6 homolog isoform X1 |
id | description |
---|---|
K24363 | SEZ6; seizure protein 6 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021623134.2 | False | 5416 | mRNA | 0.47 | 18 | 24751606 | 24978957 |
XM_021623135.2 | False | 5407 | mRNA | 0.47 | 17 | 24751606 | 24978957 |
XM_036937253.1 | True | 5789 | mRNA | 0.47 | 17 | 24751606 | 24978957 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110537242 | LOC106568081 | coding | downstream | 4607 | 24737872 ~ 24746999 (-) |
LOC100301685 | rdh12 | coding | downstream | 14507 | 24734911 ~ 24737099 (-) |
LOC110536825 | LOC106603276 | coding | downstream | 21232 | 24727999 ~ 24730374 (-) |
mrm1 | mrm1 | coding | downstream | 26210 | 24720384 ~ 24725396 (-) |
LOC110537240 | lhx1 | coding | downstream | 128194 | 24617118 ~ 24623412 (-) |
LOC110537246 | LOC106568078 | coding | upstream | 57871 | 25036828 ~ 25142397 (-) |
LOC110536826 | LOC106568076 | coding | upstream | 168232 | 25147189 ~ 25151399 (-) |
LOC110537255 | NA | coding | upstream | 313063 | 25292020 ~ 25292876 (-) |
LOC110537253 | LOC106567760 | coding | upstream | 314447 | 25293404 ~ 25296817 (-) |
LOC110537254 | LOC106567761 | coding | upstream | 318572 | 25297529 ~ 25300040 (-) |
G1052118 | NA | non-coding | downstream | 115530 | 24635777 ~ 24636076 (-) |
G1052113 | NA | non-coding | downstream | 117988 | 24630737 ~ 24633618 (-) |
LOC110537239 | aatf | non-coding | downstream | 136894 | 24608246 ~ 24617116 (-) |
LOC118936414 | NA | non-coding | downstream | 149452 | 24600309 ~ 24607820 (-) |
G1053815 | NA | non-coding | upstream | 61141 | 25040098 ~ 25040375 (-) |
G1053817 | NA | non-coding | upstream | 65228 | 25044185 ~ 25044646 (-) |
G1053818 | NA | non-coding | upstream | 65915 | 25044872 ~ 25045144 (-) |
G1053824 | NA | non-coding | upstream | 70496 | 25049453 ~ 25049851 (-) |
G1052040 | acaca | other | downstream | 196606 | 24554697 ~ 24555000 (-) |
G1050429 | NA | other | downstream | 1507336 | 23243637 ~ 23244270 (-) |
G1049722 | NA | other | downstream | 2062009 | 22689161 ~ 22689597 (-) |
LOC110536820 | LOC106603249 | other | downstream | 2110007 | 22607858 ~ 22654480 (-) |
G1054211 | NA | other | upstream | 644922 | 25623879 ~ 25624637 (-) |
G1054232 | NA | other | upstream | 678312 | 25657269 ~ 25659005 (-) |
G1055010 | NA | other | upstream | 2001826 | 26980783 ~ 26982355 (-) |
G1055199 | NA | other | upstream | 2166253 | 27145210 ~ 27145493 (-) |
G1056225 | NA | other | upstream | 2999069 | 27978026 ~ 27978436 (-) |