Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110537246 |
| gene name | LOC106568078 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 25036828 ~ 25142397 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036937256.1 | False | 8939 | mRNA | 0.50 | 39 | 25036828 | 25140835 |
| XM_036937255.1 | False | 9302 | mRNA | 0.50 | 41 | 25036828 | 25142397 |
| TU1200633 | True | 1609 | lncRNA | 0.35 | 1 | 25036986 | 25038594 |
24,940,000
24,960,000
24,980,000
25,000,000
25,020,000
25,040,000
25,060,000
25,080,000
25,100,000
25,120,000
25,140,000
NC_048576.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537244 | LOC106568079 | coding | downstream | 57871 | 24751606 ~ 24978957 (-) |
| LOC110537242 | LOC106568081 | coding | downstream | 289829 | 24737872 ~ 24746999 (-) |
| LOC100301685 | rdh12 | coding | downstream | 299729 | 24734911 ~ 24737099 (-) |
| LOC110536825 | LOC106603276 | coding | downstream | 306454 | 24727999 ~ 24730374 (-) |
| mrm1 | mrm1 | coding | downstream | 311432 | 24720384 ~ 24725396 (-) |
| LOC110536826 | LOC106568076 | coding | upstream | 4792 | 25147189 ~ 25151399 (-) |
| LOC110537255 | NA | coding | upstream | 149623 | 25292020 ~ 25292876 (-) |
| LOC110537253 | LOC106567760 | coding | upstream | 151007 | 25293404 ~ 25296817 (-) |
| LOC110537254 | LOC106567761 | coding | upstream | 155132 | 25297529 ~ 25300040 (-) |
| LOC110537261 | LOC106567765 | coding | upstream | 648967 | 25791364 ~ 25797619 (-) |
| G1053733 | NA | non-coding | downstream | 88937 | 24924574 ~ 24947891 (-) |
| G1053709 | NA | non-coding | downstream | 141497 | 24894910 ~ 24895331 (-) |
| G1053682 | NA | non-coding | downstream | 185633 | 24849012 ~ 24851195 (-) |
| G1052118 | NA | non-coding | downstream | 400752 | 24635777 ~ 24636076 (-) |
| G1052113 | NA | non-coding | downstream | 403210 | 24630737 ~ 24633618 (-) |
| G1053906 | NA | non-coding | upstream | 32585 | 25174982 ~ 25175209 (-) |
| G1053908 | NA | non-coding | upstream | 33181 | 25175578 ~ 25175990 (-) |
| G1053909 | NA | non-coding | upstream | 36433 | 25178830 ~ 25179239 (-) |
| G1053914 | NA | non-coding | upstream | 50410 | 25192807 ~ 25196054 (-) |
| G1053939 | lgals9 | non-coding | upstream | 96442 | 25238839 ~ 25248756 (-) |
| LOC118936414 | NA | other | downstream | 429008 | 24600309 ~ 24607820 (-) |
| G1052040 | acaca | other | downstream | 481828 | 24554697 ~ 24555000 (-) |
| G1050429 | NA | other | downstream | 1792558 | 23243637 ~ 23244270 (-) |
| G1049722 | NA | other | downstream | 2347231 | 22689161 ~ 22689597 (-) |
| LOC110536820 | LOC106603249 | other | downstream | 2395229 | 22607858 ~ 22654480 (-) |
| G1054211 | NA | other | upstream | 481482 | 25623879 ~ 25624637 (-) |
| G1054232 | NA | other | upstream | 514872 | 25657269 ~ 25659005 (-) |
| G1055010 | NA | other | upstream | 1838386 | 26980783 ~ 26982355 (-) |
| G1055199 | NA | other | upstream | 2002813 | 27145210 ~ 27145493 (-) |
| G1056225 | NA | other | upstream | 2835629 | 27978026 ~ 27978436 (-) |
| G1053815 | NA | non-coding | upstream | 1504 | 25040098 ~ 25040375 (-) |
| G1053817 | NA | non-coding | upstream | 5591 | 25044185 ~ 25044646 (-) |
| G1053818 | NA | non-coding | upstream | 6278 | 25044872 ~ 25045144 (-) |
| G1053824 | NA | non-coding | upstream | 10859 | 25049453 ~ 25049851 (-) |
| G1053878 | NA | non-coding | upstream | 96208 | 25134802 ~ 25135251 (-) |
