Gene
RNA
| Item | Value |
|---|---|
| gene id | wnt11f2 |
| gene name | LOC106568050 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 26135796 ~ 26138363 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| protein Wnt-11-like |
| id | name | namespace |
|---|---|---|
| GO:0030100 | regulation of endocytosis | biological_process |
| GO:0060898 | eye field cell fate commitment involved in camera-type eye formation | biological_process |
| GO:0090037 | positive regulation of protein kinase C signaling | biological_process |
| GO:0035567 | non-canonical Wnt signaling pathway | biological_process |
| GO:0031016 | pancreas development | biological_process |
| GO:0030182 | neuron differentiation | biological_process |
| GO:0051496 | positive regulation of stress fiber assembly | biological_process |
| GO:0043066 | negative regulation of apoptotic process | biological_process |
| GO:0000132 | establishment of mitotic spindle orientation | biological_process |
| GO:0090090 | negative regulation of canonical Wnt signaling pathway | biological_process |
| GO:0001839 | neural plate morphogenesis | biological_process |
| GO:0045860 | positive regulation of protein kinase activity | biological_process |
| GO:0070121 | Kupffer's vesicle development | biological_process |
| GO:0045892 | negative regulation of transcription, DNA-templated | biological_process |
| GO:0045893 | positive regulation of transcription, DNA-templated | biological_process |
| GO:0030308 | negative regulation of cell growth | biological_process |
| GO:0060021 | roof of mouth development | biological_process |
| GO:0007417 | central nervous system development | biological_process |
| GO:0060031 | mediolateral intercalation | biological_process |
| GO:0030335 | positive regulation of cell migration | biological_process |
| GO:0030336 | negative regulation of cell migration | biological_process |
| GO:0034394 | protein localization to cell surface | biological_process |
| GO:0001947 | heart looping | biological_process |
| GO:0008078 | mesodermal cell migration | biological_process |
| GO:0061101 | neuroendocrine cell differentiation | biological_process |
| GO:0001702 | gastrulation with mouth forming second | biological_process |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0005615 | extracellular space | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0005109 | frizzled binding | molecular_function |
| GO:0030295 | protein kinase activator activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021623196.2 | True | 1925 | mRNA | 0.45 | 5 | 26135796 | 26138363 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| igbp1 | LOC106567775 | coding | downstream | 19217 | 26113536 ~ 26116579 (-) |
| LOC110537274 | cxb1 | coding | downstream | 22443 | 26109701 ~ 26113353 (-) |
| LOC110537272 | LOC106567774 | coding | downstream | 29434 | 26099610 ~ 26106362 (-) |
| trnav-uac-17 | NA | coding | downstream | 39142 | 26096579 ~ 26096654 (-) |
| zgc:113208 | LOC106567768 | coding | downstream | 245997 | 25885945 ~ 25889799 (-) |
| LOC110537277 | LOC106567777 | coding | upstream | 7614 | 26145977 ~ 26210191 (-) |
| fam155b | LOC106567779 | coding | upstream | 77556 | 26215919 ~ 26264356 (-) |
| c12hxorf56 | cssa13hxorf56 | coding | upstream | 501343 | 26639706 ~ 26645901 (-) |
| stard8 | LOC106567782 | coding | upstream | 536615 | 26674978 ~ 26717652 (-) |
| LOC110537285 | LOC106567783 | coding | upstream | 593088 | 26731451 ~ 26739037 (-) |
| G1054474 | LOC106567773 | non-coding | downstream | 49601 | 26085074 ~ 26086195 (-) |
| G1054466 | LOC106567773 | non-coding | downstream | 57287 | 26077471 ~ 26078509 (-) |
| G1054394 | NA | non-coding | downstream | 141643 | 25985418 ~ 25994153 (-) |
| G1054419 | NA | non-coding | downstream | 156968 | 25977868 ~ 25978828 (-) |
| G1054509 | NA | non-coding | upstream | 36686 | 26175049 ~ 26175286 (-) |
| G1054684 | NA | non-coding | upstream | 274124 | 26412487 ~ 26416866 (-) |
| G1054685 | NA | non-coding | upstream | 278544 | 26416907 ~ 26423895 (-) |
| G1054885 | NA | non-coding | upstream | 603326 | 26741689 ~ 26741938 (-) |
| G1054914 | NA | non-coding | upstream | 641467 | 26779830 ~ 26786466 (-) |
| G1054232 | NA | other | downstream | 476791 | 25657269 ~ 25659005 (-) |
| G1054211 | NA | other | downstream | 511159 | 25623879 ~ 25624637 (-) |
| LOC118936414 | NA | other | downstream | 1527976 | 24600309 ~ 24607820 (-) |
| G1052040 | acaca | other | downstream | 1580796 | 24554697 ~ 24555000 (-) |
| G1050429 | NA | other | downstream | 2891526 | 23243637 ~ 23244270 (-) |
| G1055010 | NA | other | upstream | 842420 | 26980783 ~ 26982355 (-) |
| G1055199 | NA | other | upstream | 1006847 | 27145210 ~ 27145493 (-) |
| G1056225 | NA | other | upstream | 1839663 | 27978026 ~ 27978436 (-) |
| G1057449 | LOC106567827 | other | upstream | 2038023 | 28176386 ~ 28177073 (-) |
| G1057600 | NA | other | upstream | 2302906 | 28441269 ~ 28441695 (-) |
