fam155b (LOC106567779)


Basic Information

Item Value
gene id fam155b
gene name LOC106567779
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 26215919 ~ 26264356 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021623202.2
ttgagataaaaacggctgcattggacctttaatggGAATGTGAGAGGAGATGTGGAACCACAGGGGCGACCAATAGCGCAGGCGCTCCACCCTCTTCAATTAAATAATCTGAAGGTTTTCTGTGCTAAACCGAAGATGGCGACAGACTAAACTAGACTGTCAAAAGGAAGGGGAAGATGAGAGGCAAATGTCGCTTTTTGCACTAAAAACGGAAGAAAAAATAAGACTTGTCATGTTTGAGAATGGCAGATATAGAGTAAAGATTTCGTTTTTGTACGTGCTATGCGTTTCTTGTGTGATGCTGCACCGGTGCTGGGGGTGTCGGTAGGATTTCACAACATGTTACAATTTTGGGTGTATAGGGAATATTATGCCGGACGTTATCTATTTGCAATGGATTAGACGCCGGGGTTTGGAGCTGGATTGATTTCTTGACACAACAACTTGGAAAAAATGCTTCCCATCACCATGTTGCAAACGAGGTAGGGGATATATTGCAAAGGTGAAAAAGCCATCTGAGATCGCTTTTGTCTACCCCCTAAAATATGATCAGGGGTGCTTGGATGTTTCGAAGGGAAGATGACGCCGTGTTAAAAATATGTTGTGCACCCAAACAAAACGACAAACCCTGTGCCGATTCCGAGAGGGTACAGAAATGGCGAATGTCTTTGGCATCCCTATTATTTTTCACTGTCCTTCTCTCTAATCACCTCTGGCTGTGTGCTGGAGTTAAACTGAGGTCCAAGGATAGGAGCAACCGCAAAATCTGGATCAACGCGACTGACGGGGTCCACCCGGCTCTAAATGAGGGGAAATGTGGTATTTTTCTAAGCAATTTGACCAAATCCGCTGCTCCAGGTCCTCATTGCACTGATGCTCAAAGCCACCACACACACCTGGAGTCAGCCTGCACCATATTGTATCGGCAAAAAACTGACTTTAGGTCCTCAACTCCATCAACGTTCTCGTCACAGATGTTACTTGATTATTTTAGGAATTTTAGCCTCTCTTTTTGTGATTCTTACACCATTTCCGACTTACTGTTGGGGATGTCAAGCCCAGACAGTTTAAATTGCAGTCTTCAGAACATGGTTTTGGATTTGTTTAGCAGCGGTGGGGATGATGAGGATGTCTGCAGCATCTGTATCCAGGCGTACATGAGGCTGGACCAACACGCTCAGGAAAAATATGAGGAGTTTGACTTCTTCTTTCTCAAGTATTTATCAGAGGATTATTCTGTCCGATCCCACACAGAGGACTGTAAGTCAGTCTACAAAGCCTGGTTATGCTCAGAATACTTCAACGCCACCCAGAGCCAGTGTCAACACAGGATTCCCTGCAAGCAATATTGTCTGGAGGTCCAGACCATGTGCCCCTTTGTGTTACCAGACAATGACGACTTGGTCTATGGAGGACAATCCAGTTTCATCTGTGCAGGGCTACTAGAAAACCATTTAACCAATGCAGACCCAGAGTGTTGTGACGTCAGATGGAGTGGCTGCGACCCCTCTGTGGGGGCGGCGTGTGCCCTGACCCAGCTTCCGGGGTCATCATCATGGCAGCGGCGCAGCTCCCCACCTGTGTCGGCTGCGTCGCGACTGTGCAGCAGCAGACTCAGACTGTGTGTTCTGGTCCTCATCCTGCTGCACACTGTCGTCTCCTTTTCCACTGTCCAGAGCAGTGGCGCAGTGGGCCTGGAGGCCATGGTACCCCTGCCCCTGGAGGAGAGCTCTGCCCGAGAGGAGTGACTGATGATGAACAAGAGTTTCTACTGTTCCCCCCCGGCTTCCAGTCTACAGAGACTCCCTTCCTTCCCACTACCTGAGGAGTGAGGCGTTtataaccctctctctccatccagtccCCTCCACAGGACATCAGGAATGAGGAGGTTATACACCACTCCAGGGAAGGCTACAGGTCGGTATACCTCTTCGCCCTCTACCACACTAGAGGTGTGGCGAAGCACGGGCCCTCCCCTCCCGCAACACAGAGGGATATGGAGGTAGATAAGGCTTCGGAACTGAGAGCCAGCCATATCTCACGTGTAAGGAGGACATGAGAGGGCATGGTGAAAGAGGCGGGTCTCCCATCATGCTGAAAGAGGTACTGAATGCTGTTTCTAAGAAGGGTTTGGGTACAAATGGCCTTTTTCGCTTATCACCACTCTATTTAATACGTTTGAGTGATGGTTTTGGGGAGTTACGTACGATGTTGAGTTTGTGAATTGCACAATTGGGAAAGCGTGAGTTGCAGGCTTGTATGCTACTTTTTacaagttttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgaatgcagtGAACAAGTCAGCAATTTAATTTATATGACCCAACACATGAAATCAGGTGATCATTACATCTTTCAAGCCAATAGTATACTCGCGAGAAATACTTTGTTTGGCTTACAGTAAATATAGTTATTACTATTCTCAGTAACACTACCCTCATTGTCATATACCAAGCAGAATAATTTCATGCAAATATTAGATTACAGATCCTAACCGAAGGTAAACCATGTTGTTTTTGATAGATGTCAGAGGTATACTATTAATGCTGTGGAGGAACATGTGTCTATGCAAAGCTGATTGAAACCAGTGGAAACTCCCCCTGGGTGTCTAATCGCTTACAGAAGGTAGATGATTGTGCCATGGAAGACTGTCTGGATTATAACTACACCAATCATTTCTTACTCATAAAACAGACAATTTAccacatataacatataacaaaGACCCAGAATGGCTAATTGGAGCAGGAGGCCCTTAATCACGGCTAAatgtttaagaaaatattttcaaGATGCGAATGCGTCGCATCATCAAAAACAATTTCTGTCACAGTAGAGATTTAGGGTGTGTCTATGCCCTCAATGTGAAATAGAGTGATTATTTGGAAAGAACCAaaacgtttatatatatatatatatatatatattacttctaaATTCTAAATATCAGAGATATGAAAAAGATCCACCTTGATTTTTTTCATAAAGGTCATCTGTTGGCACGGTATTGTTATTTGTAAAGAAGAGCTAGAGTATAACTATATAAATGGTTCTCATGTGTTTCTGATTAATCACATAAAATTATTCTGACCTCTCTCTTCCTGGCATAATCTGTgtattattaaaaataaaacgttTTTTACATTTGGGCTTGTCTTTGGGAAGCTGAAATAAGATGTCTTCCAATGTGACAAATTGATtcacaaatacaaatatatttgacACATTATTTGTATCTTACAAAGTCATTCTAAGCCAAAACTATTGTTTTAGAGTAATCCTGGGTTCACCTCccaaacacatactgtatgtgacctTGGTCTACCACAACACAGGCATACTGTTTATGTCCTAACAAAGCTATTGTAACTATTTTACTATTGAAAAACTATATCATAGTAGAGGTTTTTACAGAGTATATGTATATGAATTGAACTTGGATTTGAAAATATGATATAAAAAAGTATGACATTTATGAGATTCTTCATTTAtcctaaataaaatatataatatcactgtagcCTTTTAATGCCTACAATGAATTAGTAGGTGCTAATTTTATGTCAGTGTCTAACGAACTGCTAGTTTCTTTAGTTTATATTGCTAAAAGATAGTTATTTTTCTTACGACTGACTGTGGTGTGTAACTGAATATCTAACAGACATTGTTGACATGCTGATTTATAAACTGGTTGAAGATACCAAACACTGTAAAAGAGACAACCATGTTGATAACTATACCTTGGGATTGAAAATCCTGCCTGCCTTGTATGACTAACGTGTGAAACATTGTCTGGTCTCCCTATTTCCAAAAAGGCCACTTGTACCCTTCATTCATATCAGTCATGGCTGTTGCTCATCCTGCTAGAATATGAAGGAGTCGTACCTCTATCAGAGAAGGGAAAAGGGGATATACATGGTGTCCTAAGCCTGTATTCTGTTAGGGAAATACTTCTTATGCCATTTTATACACTGTGCTTCATTGTTTAGAACGTTTTGCACTAGTTCtaataacatttatttttctcTGAGATTGTTTTGAAACTGTGCTAATTAATTCCGTTCTAAAAACAAATATTATCCCATATCTGTGTTTCTAGCTAACCTGTATATATGAAATCGGTTTTCTGTTTCATTTGTATTTTGGGCAGATCAGTGCCTGTTCACTGTTAAAGCCCAATAAAGTAATACAATTGTTCATCAACA

Function

NR:

description
transmembrane protein FAM155A-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021623202.2 True 4264 mRNA 0.42 3 26215919 26264356

Neighbor

gene id symbol gene type direction distance location
LOC110537277 LOC106567777 coding downstream 5728 26145977 ~ 26210191 (-)
wnt11f2 LOC106568050 coding downstream 77556 26135796 ~ 26138363 (-)
igbp1 LOC106567775 coding downstream 99340 26113536 ~ 26116579 (-)
LOC110537274 cxb1 coding downstream 102566 26109701 ~ 26113353 (-)
LOC110537272 LOC106567774 coding downstream 109557 26099610 ~ 26106362 (-)
c12hxorf56 cssa13hxorf56 coding upstream 375350 26639706 ~ 26645901 (-)
stard8 LOC106567782 coding upstream 410622 26674978 ~ 26717652 (-)
LOC110537285 LOC106567783 coding upstream 467095 26731451 ~ 26739037 (-)
ar-alpha ar-alpha coding upstream 544997 26809353 ~ 26863253 (-)
LOC110537288 NA coding upstream 621677 26886033 ~ 26888305 (-)
G1054509 NA non-coding downstream 40633 26175049 ~ 26175286 (-)
G1054490 NA non-coding downstream 58398 26129084 ~ 26157521 (-)
G1054474 LOC106567773 non-coding downstream 129724 26085074 ~ 26086195 (-)
G1054466 LOC106567773 non-coding downstream 137410 26077471 ~ 26078509 (-)
G1054684 NA non-coding upstream 148131 26412487 ~ 26416866 (-)
G1054685 NA non-coding upstream 152551 26416907 ~ 26423895 (-)
G1054885 NA non-coding upstream 477333 26741689 ~ 26741938 (-)
G1054914 NA non-coding upstream 515474 26779830 ~ 26786466 (-)
G1054920 LOC106567784 non-coding upstream 527785 26792141 ~ 26792628 (-)
G1054232 NA other downstream 556914 25657269 ~ 25659005 (-)
G1054211 NA other downstream 591282 25623879 ~ 25624637 (-)
LOC118936414 NA other downstream 1608099 24600309 ~ 24607820 (-)
G1052040 acaca other downstream 1660919 24554697 ~ 24555000 (-)
G1050429 NA other downstream 2971649 23243637 ~ 23244270 (-)
G1055010 NA other upstream 716427 26980783 ~ 26982355 (-)
G1055199 NA other upstream 880854 27145210 ~ 27145493 (-)
G1056225 NA other upstream 1713670 27978026 ~ 27978436 (-)
G1057449 LOC106567827 other upstream 1912030 28176386 ~ 28177073 (-)
G1057600 NA other upstream 2176913 28441269 ~ 28441695 (-)

Expression


Co-expression Network