Item | Value |
---|---|
gene id | LOC110537339 |
gene name | NA |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048576.1 |
NCBI id | CM023230.2 |
chromosome length | 102853256 |
location | 28214814 ~ 28221569 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
PREDICTED: uncharacterized protein LOC109194994 isoform X1 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XR_005034935.1 | False | 2703 | mRNA | 0.40 | 5 | 28214814 | 28221558 |
XR_002475604.2 | False | 2992 | mRNA | 0.41 | 6 | 28214814 | 28221569 |
XR_005034934.1 | False | 2718 | mRNA | 0.41 | 5 | 28214814 | 28221569 |
TU1204710 | True | 2988 | lncRNA | 0.40 | 5 | 28214845 | 28221515 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110537335 | LOC106567828 | coding | downstream | 29944 | 28181967 ~ 28184870 (-) |
LOC110537333 | LOC106567826 | coding | downstream | 38812 | 28170969 ~ 28176002 (-) |
LOC110536834 | mrpl48 | coding | downstream | 152995 | 28056959 ~ 28061819 (-) |
dnajb13 | dnajb13 | coding | downstream | 158323 | 28042588 ~ 28056491 (-) |
LOC110537327 | ppme1 | coding | downstream | 183892 | 28013959 ~ 28030922 (-) |
LOC110537342 | LOC106567833 | coding | upstream | 22722 | 28244291 ~ 28271665 (-) |
LOC118937653 | NA | coding | upstream | 100071 | 28321640 ~ 28322881 (-) |
LOC110537346 | LOC106567838 | coding | upstream | 231323 | 28452892 ~ 28468708 (-) |
LOC110537349 | NA | coding | upstream | 282593 | 28504162 ~ 28505648 (-) |
LOC110537350 | LOC106568039 | coding | upstream | 314997 | 28536566 ~ 28566720 (-) |
G1057435 | LOC106567831 | non-coding | downstream | 518 | 28201329 ~ 28214296 (-) |
G1057479 | NA | non-coding | downstream | 19132 | 28194262 ~ 28195682 (-) |
G1057476 | NA | non-coding | downstream | 22435 | 28191808 ~ 28192379 (-) |
G1057437 | NA | non-coding | downstream | 23141 | 28188957 ~ 28191673 (-) |
G1057448 | NA | non-coding | downstream | 34754 | 28178823 ~ 28180060 (-) |
G1057500 | NA | non-coding | upstream | 35062 | 28256631 ~ 28257578 (-) |
G1057490 | NA | non-coding | upstream | 95556 | 28317125 ~ 28321274 (-) |
G1057582 | LOC106567837 | non-coding | upstream | 215203 | 28436772 ~ 28439786 (-) |
G1057606 | NA | non-coding | upstream | 225240 | 28446809 ~ 28447161 (-) |
G1057632 | NA | non-coding | upstream | 281093 | 28502662 ~ 28503053 (-) |
G1057449 | LOC106567827 | other | downstream | 37741 | 28176386 ~ 28177073 (-) |
G1056225 | NA | other | downstream | 236378 | 27978026 ~ 27978436 (-) |
G1055199 | NA | other | downstream | 1069321 | 27145210 ~ 27145493 (-) |
G1055010 | NA | other | downstream | 1232459 | 26980783 ~ 26982355 (-) |
G1054232 | NA | other | downstream | 2555809 | 25657269 ~ 25659005 (-) |
G1057600 | NA | other | upstream | 219700 | 28441269 ~ 28441695 (-) |
G1057796 | LOC106567846 | other | upstream | 660959 | 28882528 ~ 28886411 (-) |
LOC110537362 | LOC106567848 | other | upstream | 674013 | 28895582 ~ 29021369 (-) |
G1057998 | NA | other | upstream | 1045875 | 29267444 ~ 29267991 (-) |
LOC110537376 | NA | other | upstream | 1172026 | 29393595 ~ 29436595 (-) |