Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110537405 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 29951555 ~ 29960420 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: lipid droplet-associated hydrolase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002475620.2 | False | 2368 | mRNA | 0.44 | 3 | 29951698 | 29960420 |
| TU1205835 | False | 1816 | TUCP | 0.42 | 2 | 29951555 | 29953654 |
| TU1205836 | True | 317 | lncRNA | 0.54 | 2 | 29957507 | 29959998 |
29,948,000
29,950,000
29,952,000
29,954,000
29,956,000
29,958,000
29,960,000
29,962,000
29,964,000
29,966,000
29,968,000
NC_048576.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537401 | LOC106567879 | coding | downstream | 99554 | 29842845 ~ 29852144 (-) |
| LOC110537390 | NA | coding | downstream | 194703 | 29745513 ~ 29757033 (-) |
| LOC110537384 | LOC106567873 | coding | downstream | 269338 | 29679311 ~ 29682360 (-) |
| LOC110536842 | LOC106568042 | coding | downstream | 343239 | 29607637 ~ 29608459 (-) |
| LOC110536839 | LOC106567864 | coding | downstream | 478497 | 29465879 ~ 29473201 (-) |
| LOC110537397 | LOC106567884 | coding | upstream | 5898 | 29966318 ~ 29968956 (-) |
| LOC110537402 | LOC106567887 | coding | upstream | 276927 | 30237347 ~ 30257703 (-) |
| LOC110537396 | LOC106567888 | coding | upstream | 309896 | 30270316 ~ 30304242 (-) |
| LOC110537406 | LOC106567890 | coding | upstream | 347455 | 30307875 ~ 30323144 (-) |
| LOC110537410 | LOC108431284 | coding | upstream | 386931 | 30347351 ~ 30369324 (-) |
| G1058384 | LOC106567882 | non-coding | downstream | 22025 | 29928616 ~ 29929673 (-) |
| G1058353 | NA | non-coding | downstream | 80007 | 29871488 ~ 29871691 (-) |
| G1058352 | NA | non-coding | downstream | 80700 | 29870758 ~ 29870998 (-) |
| G1058351 | NA | non-coding | downstream | 81180 | 29870141 ~ 29870518 (-) |
| G1058350 | NA | non-coding | downstream | 82214 | 29869136 ~ 29869484 (-) |
| G1058395 | NA | non-coding | upstream | 3506 | 29963926 ~ 29964349 (-) |
| G1058446 | NA | non-coding | upstream | 87688 | 30048108 ~ 30048488 (-) |
| G1058451 | NA | non-coding | upstream | 90314 | 30050734 ~ 30051037 (-) |
| G1058522 | NA | non-coding | upstream | 152087 | 30112507 ~ 30112725 (-) |
| G1058564 | NA | non-coding | upstream | 185158 | 30145578 ~ 30148262 (-) |
| G1058320 | NA | other | downstream | 148082 | 29800853 ~ 29803616 (-) |
| LOC110537376 | NA | other | downstream | 529383 | 29393595 ~ 29436595 (-) |
| G1057998 | NA | other | downstream | 683707 | 29267444 ~ 29267991 (-) |
| LOC110537362 | LOC106567848 | other | downstream | 1044679 | 28895582 ~ 29021369 (-) |
| G1057796 | LOC106567846 | other | downstream | 1065287 | 28882528 ~ 28886411 (-) |
| G1059183 | NA | other | upstream | 374407 | 30334827 ~ 30335256 (-) |
| LOC110537417 | rnasek | other | upstream | 486972 | 30447386 ~ 30452456 (-) |
| LOC110537425 | LOC106567906 | other | upstream | 674638 | 30633836 ~ 30638038 (-) |
| LOC110537432 | NA | other | upstream | 777656 | 30738076 ~ 30773877 (-) |
| G1059610 | NA | other | upstream | 1107165 | 31067585 ~ 31070860 (-) |
| LOC110537405 | NA | other | downstream | 3853 | 29951555 ~ 29960420 (-) |
