LOC110536844 (LOC106603575)


Basic Information

Item Value
gene id LOC110536844
gene name LOC106603575
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 30476900 ~ 30479671 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110536844
ATGTACAGAGAGACCTCAGCCTACTCCTTCCAAGGACACCAGGAAGTGCAGAGATATCTGGAGAGATACTGCCAGAGCCACCGCATCACACCAAACATCAAGTTCAGCACCGTGGTGGAGGAGGGGATCCCTGTCACCATGGCAACAGAGGAGAAGGGACAAATAACGACATGGGAGGTGACTTCACGTGACAAGTCGGGATCACGTAACACTGAAACATTTGATTCTGTGTTAATCTGCAGCGGGCACTACTCTGACCCCCACATCCCATCCATCCCTGGGCTTGAGCGATTTAAAGGTGCACACCAGCTGATCTACAGTCACTCATACCGCCACACAGGGCCTATCTCAGGTCAGTCGGTGGTGGTGCTGGGTGCTGGCACCTCAGGACTGGACATCTCACTAGAACTGGGTTGATCTAATGCCCAGGTGACTCTGAGCCCCTGCCCTTCCCTCTGCCCTATTTGGTCTACCAGGCTGTGGTGGAGGTCCAGGAGGGTGGGTCTCTGCAGTTCCGGGATGGGTCCATTATCCAGGCCCAGGTCCTGCTGCTCAGTACAGGCTACAACTTCAGCTACCCCTTCCTGGAGCCAGCCCAGCTGGGCCTGGAGATCCAGGagcacctggtaacccactcTACAGGTTCCTGATGCCTCCAGCCTTCCCATCACTCTTCATCATAGGCATCTGCAAAATTATTTGCCCCTTCCCCCACTTTCACTGCCAGGCtcagtttgCCCTTGCAGTGACGGAGGGCTCCATGGCCCTGCGGTCACGGGCTGAGATGCAAgaggaggaccagagagagatgaagaggaaggCGGAGAGGGGGGTGCAGCTCAAACATATGCTGAAGATGGACAAGGACCAGTGCCCAGACCTTTGCTCAGACTGGGATGTTTCCCCCTCTGCCCCCTGTCACGCAGAGCCTGTATGAGGAGGTATGGAGGCAGAGACATGTTCACCCACAGAACTACAGGCAGCTAAATGATCGACTCATTACCGACACCCAGTGGGAGCAACAGGAACTACAGGCTGGtgaatgaggaggagaggcagcTTGGTCTCAgggactagatgtaacatagtaaatgggTAAATTCAGAACAGTGACACTAGTATGATATGtaatgtttggtatggttacgtaagacagatggttacttaagacaACAAGCACTCAAATGGGTGGCAGTATAAcgcaaatg

Function

NR:

description
PREDICTED: flavin-containing monooxygenase FMO GS-OX4-like

GO:

id name namespace
GO:0004497 monooxygenase activity molecular_function
GO:0050662 obsolete coenzyme binding molecular_function
GO:0000166 nucleotide binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110536844 True 1208 mRNA 0.54 6 30476900 30479671

Neighbor

gene id symbol gene type direction distance location
LOC110537419 LOC106567900 coding downstream 2489 30467153 ~ 30474411 (-)
LOC110537418 LOC106567899 coding downstream 11644 30462149 ~ 30465256 (-)
LOC110537415 LOC106567896 coding downstream 16616 30456535 ~ 30460284 (-)
LOC110537417 rnasek coding downstream 24444 30447386 ~ 30452456 (-)
si:ch1073-143l10.2 LOC106567895 coding downstream 53998 30418042 ~ 30422902 (-)
LOC110537420 LOC106567901 coding upstream 14450 30494121 ~ 30520834 (-)
LOC110537422 LOC106567903 coding upstream 58116 30537787 ~ 30563755 (-)
LOC110537425 LOC106567906 coding upstream 154165 30633836 ~ 30638038 (-)
LOC110537426 NA coding upstream 169005 30648676 ~ 30672125 (-)
mipepb LOC106567911 coding upstream 260094 30739765 ~ 30755440 (-)
G1059240 NA non-coding downstream 33944 30442728 ~ 30442956 (-)
G1059239 NA non-coding downstream 34557 30441537 ~ 30442343 (-)
G1059232 NA non-coding downstream 44590 30432096 ~ 30432310 (-)
G1059226 NA non-coding downstream 51645 30424681 ~ 30425255 (-)
G1059220 NA non-coding downstream 74676 30401998 ~ 30402224 (-)
G1059258 NA non-coding upstream 24517 30504188 ~ 30504825 (-)
G1059280 NA non-coding upstream 106223 30585894 ~ 30586190 (-)
G1059281 NA non-coding upstream 108072 30587743 ~ 30587974 (-)
G1059282 NA non-coding upstream 109066 30588737 ~ 30589756 (-)
G1059283 NA non-coding upstream 110476 30590147 ~ 30590386 (-)
G1059183 NA other downstream 141644 30334827 ~ 30335256 (-)
LOC110537405 NA other downstream 523246 29951555 ~ 29960420 (-)
G1058320 NA other downstream 673284 29800853 ~ 29803616 (-)
LOC110537376 NA other downstream 1054585 29393595 ~ 29436595 (-)
LOC110537432 NA other upstream 258405 30738076 ~ 30773877 (-)
G1059610 NA other upstream 587914 31067585 ~ 31070860 (-)
G1061331 NA other upstream 1511539 31991210 ~ 31992555 (-)
G1062051 NA other upstream 2559814 33039485 ~ 33086066 (-)

Expression


Co-expression Network