LOC110536846 (LOC106567904)


Basic Information

Item Value
gene id LOC110536846
gene name LOC106567904
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 30602356 ~ 30603294 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036939502.1
ATGGAAAACCGCACATACAATGACCACGTTCTCCTCCTGGAGGGGTTAAAGGTCCCTCAACAGTCCACGTACCCTGCCTTCACCCTCCTCCTCATCACCTACATCTTTATCATGGTGGCCAACATCGGACTCATAGTATTGATCTCCATGGAGAGGAGCCTGCACCAGCCCATGTACATCCTCTTCTGCAACCTGCCTCTTAATGACATAGTCGGGGCTACAGTGATGATACCTCGTCTGTTATGGGACATTTTGACCACAGCTCCTGAGCGATATATCACTTACATAGAGTGTGTCATTCAGGCTTTCTGTGCTCATTTATTTGCTACCACATCACATACCATTCTCATGATCATGGCCTTTGACAGGTATGTGGCCATCTGCAACCCCCTGCGGTACGCTACCATCATGACAAACAAAATGGTTATCAGGTTGTCTATGTCTGCCTGGGGGGTGGCCATAGTCTTAGTGGGGATTTTGCTGGGCCTCACCATCCGCCTGTCACGCTGCAGGTCTAACATATTTAACCCTTACTGCGACAACGCCTCCTTATTCAAGCTCTCCTGTGAGAGTGTGCTTATAAATAACATATATGGTTTCACCTTTACTGTTGTGCTGTTTGTCTCGTCCATTGGCAGCATCAGTCTCACCTATCTCAAGATCGCCATTGTATGTCTGAGCAGTAAAAACAGCTCTTTAAACAGCAAGGCCCTGACAACCTGCAGCACACACTTACTAGTCTACCTCATTGTAATTGGATTTGGAGTCACCATTATCATCCTCCATCGCTTCCCAAAATATGCAGAACTTGGCCAAATGTGTAGTGTGCTGTTCCCCGTGATCCCTACTTGTCTCAACCCCATAATATATGGTTTACAGACTAAAGAGATTAAACAGAGGATATTTAGAGTGTTTCACAGAGCCAAGGTGGCTGCATGA

Function

NR:

description
PREDICTED: olfactory receptor 8U1-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036939502.1 True 939 mRNA 0.47 1 30602356 30603294

Neighbor

gene id symbol gene type direction distance location
LOC110536845 LOC106568061 coding upstream 19679 30581313 ~ 30582677 (+)
LOC110537421 pedf coding upstream 69427 30527919 ~ 30532929 (+)
serpinf2 LOC106567902 coding upstream 75006 30522661 ~ 30527350 (+)
LOC110537416 LOC106567897 coding upstream 146733 30452246 ~ 30455623 (+)
LOC110537413 LOC106567901 coding upstream 161906 30438819 ~ 30440450 (+)
LOC110537424 LOC106567905 coding downstream 5741 30609035 ~ 30611409 (+)
LOC110537427 LOC106567909 coding downstream 73324 30676618 ~ 30692318 (+)
LOC110537430 LOC106567913 coding downstream 114806 30718100 ~ 30729787 (+)
LOC110536847 LOC106567912 coding downstream 134935 30738229 ~ 30739712 (+)
LOC110537431 wrb coding downstream 170746 30774040 ~ 30788637 (+)
G1058822 NA non-coding upstream 10552 30590922 ~ 30591804 (+)
G1058821 NA non-coding upstream 11560 30590114 ~ 30590796 (+)
G1058819 NA non-coding upstream 14230 30586147 ~ 30588126 (+)
G1058818 NA non-coding upstream 16287 30585530 ~ 30586069 (+)
G1058814 NA non-coding upstream 24885 30577209 ~ 30577471 (+)
G1058855 NA non-coding downstream 29892 30633186 ~ 30643145 (+)
G1058869 NA non-coding downstream 55585 30658879 ~ 30660694 (+)
G1058883 NA non-coding downstream 70760 30674054 ~ 30674342 (+)
G1058900 NA non-coding downstream 108539 30711833 ~ 30712152 (+)
G1058905 NA non-coding downstream 134362 30737656 ~ 30771920 (+)
G1058787 LOC106567901 other upstream 85466 30516081 ~ 30516890 (+)
G1058669 NA other upstream 344807 30257057 ~ 30257549 (+)
LOC110537400 LOC106603592 other upstream 530950 30067984 ~ 30071409 (+)
G1057271 NA other upstream 703881 29898196 ~ 29898475 (+)
LOC110537386 LOC106567871 other upstream 880571 29698677 ~ 29726867 (+)
LOC110537434 NA other downstream 245244 30848508 ~ 30879117 (+)
G1059091 NA other downstream 396933 31000227 ~ 31007066 (+)
G1059685 LOC106567926 other downstream 604335 31207629 ~ 31209357 (+)
G1060470 NA other downstream 1207768 31811062 ~ 31811347 (+)
G1062404 NA other downstream 2756440 33359734 ~ 33366249 (+)

Expression


Co-expression Network