LOC110537427 (LOC106567909)


Basic Information

Item Value
gene id LOC110537427
gene name LOC106567909
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 30676618 ~ 30692318 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021623464.2
TGAACCTACGTACAGAAGAAAACTATCCGGTAGGAACGCCTCCTTCCATGAATGTCAGCTCAATTGCCCAATGAGAGCACAGAGCAAGACAGCAGTTCCTGTTTCAGTGGGTATGTTTGCCTAAGCAGCGAGAGGGATCCTGTCGAAATAAGGCATTGTGTGTGAGGGTCCCTTCTTCTGATGCTACCTGGACCTCCACAGAGCCCGGGCCTGCTGTGGAATTCCCATCCCTCAGAAAGAACGACAGCTGggacagagaacagacagcaaCGTCCACATACAGGAGAAATAATAGCCTGGAAGTTCATAGAGGTGGACTGGAAGAGAAGGGACAGTCCTGAATGTGTAGTACAGTAGAAACACCATCTATGTCAGAGATTAACAGGGTGATAGCTGCTTTTCTGTAATGTCCATCCACCTGGGCAAGATTGAATCAGTGTTATCAACTCAGTACCACGTCTCAATTGTTGCTCAGTAAACATGAGCGTGGTATCTCTACCCAAAGGAAAGTCGGCCAGTAACCCCATACACTGGAAACGGCATCATGCAATGTGATTGGTTTTGTTACAAACGCTAAATAATTTCAGAGCCAGCATTCACTAAAACGGTGGTTTGCATCATTTGGAGAGAGCAAATCtaaattatttgtatttatttttttaccttggaAATTAACAGTTTACAACCTTTAGATTTTTGCTCCAAGAGATTGGACTGATTACCTCTGGAGTCATGGGGGCCACTGGTTATGGATACTATCGTATGGTTATCTTCTTCTCCATGTTTACTGGCTACTCCCTGTACTACTTCAACAGGAAGACCTTCTCTTTTGTCATGCCCTCTGTGATGGAGGAGATTAAACTGGACAAGGATGACTTGGGCCTGATCACCAGTAGTCAGACCATGGCCTATGCCATCAGTAAGTTCATCAGTGGTGTATTGTCCGACCAGATCAGCGCTCGCTGGCTCTTCTCCATTGGCCTCTTGGTGGTGGGGGGCATCAACGTGATCTTCTCATGGTCTTCCACTGTGACTGTGTTTTCTGCTCTGTGGTTTGTCAACGGTCTGGGCCAGGGCTTAGGCTGGCCACCATGTGGGAAGGTGCTGCGCAAGTGGTTTGAGCCGTCTCAGTTTGGGACATGGTGGGCAGTGCTGTCCTGCAGCATGAACCTGGCCGGTGGATTGGGTCCTCTCCTGGCTATGGTATTGCTTCAGTACTACGACTGGAGGACTATCCTGTCCATGTCAGGCATCATCTGTGCATCCTTTTCTGTCATCTGCCTGGTGTTCATAAAGAACGAACCCAAAGACGTGGGCCTGCCCAGCATTGAGGCCTCAGCCAAGAAAGGAGTAGCCAACTGTGACAGTACTCTGAGTGAGTTCCTGCTGTCTCCATACCTGTGGGTGCTGTCCCTAGGCTACCTGGTAGTGTTCGGGGTGAAGACGGCATGCACTGACTGGGGCCAGCTCTATCTCATTCAGGATAAGGGCCAGACTGTCCTCATAgGCAGTTCCTACATGAGTGCCTTGGAGGTTGGAGGTCTGGTGGGCAGCCTCGCTGCTGGCTTCCTGTCTGACAGGGCTGTTGCAAGGCAAGGTTTGGGTACCCATGGTAACCCTCGccatgtcctcctcctctccatgatgGCTGGCATGTTTTTGTCCCTATACCTGTTCCGTGTCACTATCACAGCTGAGGCCCTAAAGGAAGCTCCCGTCTGGGTAGTGGcccttcatcctctctctgtccttattGGCCTGTCAGAGAAAGAGATCTGGATACTTTCCCTGGGTGCTATGTTCGGATTCTCCTCTTATGGACCCATCGCATTGTTTGGTGTGATAGCCAATGAAAGTGCTCCAGCAAACTATTGTGGGTCCTCCCATGCCATCGTAGCTCTCATGGCCAATGTTGGGGCTTTCTTTGCGGGACTCCCCTTCAGCACCATCGCTAAGTACTACAGCTGGGACATGGCCTTCTGGGTAGCTGAAGTGACCATTGCCGTGACGACAGTCATCTTCTTTCTGTTCCGTAACATTCGCACCAAAATGGGCCACATCCCCCAGAAAATGGATTGATTGATCTCTGCATCTCCTGAGCTATGCACAGGTTCCTGCTGTGTGACTGGGTGAATATTCTACAGCAAGGGTTGTTGGACTGGCTGCACATTACATAGCCCCTAAAGTACTAGCCTCCTATCCTTGGAAACACAACACTGTGTCAAAGTGATCTCACCTCGAGACGTTTTAGATGTTAGCAACCATGTTTTCTAAAAGGATACTTTGCTACACTTTAGTTTGCCATTTAATGCACCGTCAGAATCAAACTCCTCACCAGCCGTACAGTTCTAAGCACCTATGGCATCTACACCTACGGCATCCACTCACAGTAATGACTTCAAAAAGTATAGTATATCATGTAGGCCTAAGTCCTAAATTTCAAATAATCTGTTCTCTTACCACTTATTTAGTCGGTATAATAACTAATATTATTTGAAGCATGTTGTTGATACACAGTGAATCTGCTGTCCATTGCATTGATTGCCTTCAGTGGATGCCAAATGTCTTGAAGTTCCCGAATGCTTCATTGATGAGCCAGTATTAAAAAGATATATGTATAGAAATTTGCACAAAACGGTAATGTTTGACGATCACAGTAGTATTTCCCTTTCACTAATTCTTCATTTATAAAATAATGTTCAGTCAGGAAAATAGATACTTTACGACAAACACGACATCTATTTTTGATGACATACTGGCTTTACTAAATGGACTTTTAAAGTTTAGAGATCTTAGCTAGTTGTCTATGAAAATATTTAAATGCATCAACCTAAAAGGGATAGTTCAGgatccccagagtcagatgaacattTTAATGTATCtatgtgcagtttgaaggaaagTGCTAACTTAAGGTGATGTAGCTGTGTGAAAAAGTGTGTAATCTATGGGGGTGAAATATATTTAGGCTAACTATAATTTTTTTTCTCTATTGTTGTTTCAAATACTGTTATTATTACACAGAAATTGATTTCCCCTACACATTtttcaacatacagtggggcaaaaaagtatttagtcagccaccaattgtgcaagttctcccacttaaaaatatgagaggtctgtaattttcatcataggaacacttcaactttgacagacaaaat

Function

NR:

description
glucose-6-phosphate exchanger SLC37A4-like

GO: NA

KEGG:

id description
K08171 SLC37A4; MFS transporter, OPA family, solute carrier family 37 (glycerol-6-phosphate transporter), member 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021623464.2 True 3170 mRNA 0.45 10 30676618 30692318

Neighbor

gene id symbol gene type direction distance location
LOC110537424 LOC106567905 coding upstream 65209 30609035 ~ 30611409 (+)
LOC110536846 LOC106567904 coding upstream 73324 30602356 ~ 30603294 (+)
LOC110536845 LOC106568061 coding upstream 93941 30581313 ~ 30582677 (+)
LOC110537421 pedf coding upstream 143689 30527919 ~ 30532929 (+)
serpinf2 LOC106567902 coding upstream 149268 30522661 ~ 30527350 (+)
LOC110537430 LOC106567913 coding downstream 25782 30718100 ~ 30729787 (+)
LOC110536847 LOC106567912 coding downstream 45911 30738229 ~ 30739712 (+)
LOC110537431 wrb coding downstream 81722 30774040 ~ 30788637 (+)
igsf5a igsf5 coding downstream 106581 30798899 ~ 30824358 (+)
LOC110537434 NA coding downstream 156190 30848508 ~ 30879117 (+)
G1058883 NA non-coding upstream 2276 30674054 ~ 30674342 (+)
G1058869 NA non-coding upstream 15924 30658879 ~ 30660694 (+)
G1058855 NA non-coding upstream 33473 30633186 ~ 30643145 (+)
G1058822 NA non-coding upstream 84814 30590922 ~ 30591804 (+)
G1058821 NA non-coding upstream 85822 30590114 ~ 30590796 (+)
G1058900 NA non-coding downstream 19515 30711833 ~ 30712152 (+)
G1058905 NA non-coding downstream 45338 30737656 ~ 30771920 (+)
G1059541 NA non-coding downstream 371864 31064182 ~ 31064633 (+)
G1059543 NA non-coding downstream 372388 31064706 ~ 31065014 (+)
G1059549 NA non-coding downstream 378819 31071137 ~ 31071507 (+)
G1058787 LOC106567901 other upstream 159728 30516081 ~ 30516890 (+)
G1058669 NA other upstream 419069 30257057 ~ 30257549 (+)
LOC110537400 LOC106603592 other upstream 605212 30067984 ~ 30071409 (+)
G1057271 NA other upstream 778143 29898196 ~ 29898475 (+)
LOC110537386 LOC106567871 other upstream 954833 29698677 ~ 29726867 (+)
G1059091 NA other downstream 307909 31000227 ~ 31007066 (+)
G1059685 LOC106567926 other downstream 515311 31207629 ~ 31209357 (+)
G1060470 NA other downstream 1118744 31811062 ~ 31811347 (+)
G1062404 NA other downstream 2667416 33359734 ~ 33366249 (+)

Expression


Co-expression Network