mipepb (LOC106567911)


Basic Information

Item Value
gene id mipepb
gene name LOC106567911
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 30739765 ~ 30755440 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021623465.2
CACATCACAGAAGAAGCGAACGAGACCAAAAAGACAACATGAGAACAAGCTGACATAAACGCTCATaacgaaaaatacaaaaaaaactagATTATGTGATACATGCATTTCGAATATCGCGCATAAACTTACATTTGAAATAATCGATTTAATTcgatatatcgcccagccctatggATAGGGTCTAGTCGCGAAAGTGCAGACACGAAACATCGGAACCATTTTGAGAATTGTAAACATTCGTCATTCATGCTTGGCAGTGCTCGTTGTAGCTCAATTCTCAATGGCAGTGGTGGGCTACTAGCTAGTTAACCGAATAATTATAGAGAAATACAGTGAACAGTGAAATAAAGACTAATTTAAAATCCAATACTTTTTTGGTATTATGAAAGTATCAGCATGGATGCAAAGCAAAAGCTTAAAACGTGCTTGCTTATTATAGAGATAATCATTTAGCGCGAGCCAAGTTACTCCCCACGGAATTTCCACTTTGACCTACCTTTCTTTTTCTTTCCACAACAATCAGTTGAAGTTGTTATGATGTTGGCGTGTCAACGATTTGTGAGTGTTGTGAGGAACTCAAGGACACTATCACGACATGTCACTACTTGGTCTCCGGTTGGAGCAGCATTCAATGCCCAGCAGAGGAAAGTTGATTTGTTTCAGAAGAACGTGGGATTATTCGGGGTTCCAGGGTTGAGTACTCCGGCTGGTTTCGAGGTGGCTCAACAACGAGCGCTCAGGGAAACAGAACAGTTGGTAGAAACAGCCTGCAATAACCCACCAGGCGCCCTGACCGTGGAGACCTTCGATCAACTTTCTGACAGCCTTTGCAAAGTGGCAGATTTGGCAGATTTTGTCAAAGTTGGCCATCCAGACCCTGCCTTTCGGGATGCTGCTGAGAAGGCATGCATAAACATTGGCACAGTAGTAGAAAGGCTGAACACTAATGTTGAACTGTGTAGGAGTCTCAAGAACCTACTAGATAACAAAGAGGTTCTGGATTCTTTGGACCCAGATACAAGGAGAGTAGCAGAACTGTTCATGTTTGATTTTGAGATCAGTGGCATTCATCTGGAtgaatcaaagAGAGGGAAGGCGGTGAGCCTCAATGTCAACCTACTGGATCTGAACAATGAATTTCTAAATGGCACCCACCTGCCCAATAGGATAGAGAAGACGGCCCTGCCAGAACACATCCGACACTGCTTCTCCATAGACGGCAACTCCATCCAGATTGGAGGTCTCCATGCAGATTCTCCTGatgaactgGTGCGGGAGGCTGCTTATAAAATCTTTCTCTTTCCGAATTCAAGTCTGCTGCTTTGTCTGGATGACCTGTTGACTTGTAGGAATGAGCTAGCCAAATTAGTGGGCTATGAATCTTTTGCACACAGGGCTTTAAATGGAACTATGGCCAAGACTCCAGAGACTGTCATGAAATTCCTTGAATTGCTGACAGACAAACTCTCGGACAGAACTGCCAAAGATTTTAACCTGATGAGGGATATGAAGATGAAAATGAACTCAAGAAGCACCgtACTCATGCCATGGGACCACTCCTACTTCAGCAGCGCTGTGCGGGCAGAGAGgTATAACATCGATCCCAGCCTGTACAGTCCTTACTTCTCCTTAGGGGCCTGCATGGAGGGCCTCAACATGCTGTTCAGCCAGCTGCTGGGAGTCTCCTTCCAGAATGAACAGCCCATGGCAGGAGAGGTGTGGAGTGAAGAAGTCCGCAAGTTGGCTGTTGTCCATGAGACCGAGGGTCTTCTGGGATACATCTACTGTGACTTCTTCCGAAGGCCTGACAAACCACACCAGGATTGCCACTTCACCATCCAAGGGGGGCGTCTTAAGAAGGATGGGGAATACCAACATCCTGTGGTGGTGCTGATGCTGAGTCTGCCCCCTCCCACACGTAGCACCCCAACACTGCTCAACCCCGGCATGATGGAGAACCTGTTCCACGAGATGGGCCACGCCATGCATTCCATGCTGGGACGCACGCGTTACCAACATGTCACAGGAACTAGATGCTCCACTGACTTTGCTGAAGTCCCCTCCATCCTCATGGAGTTCTTTGCCACAGACTATCGGGTGGTAAATCAGTTTGCACGGCACTATCAGACCGGACAGCCCCTGCCCAAGAGCATGGTCTCTCGCCTTTGTGAATCCAAGAGAATCTGTGGGGCTGCCGACACTCAGCTTCAGGTTTTTTATGCTGCTTTGGATCAAGTGTATCATGGCAAGCCACAAAATCGGTCAACGACAGACATTCTAAAAAAGATGCAAGAGAAATTCTATGGACTACCTTACGTTCCAAATACTGCCTGGCAGCTGAGATTCAGCCACCTCATTGGGTACGGTGCTAAGTACTACTCATACCTCATGTCGCGCGCCATAGCCTCCATGGTGTGGAGGCAGTGCTTTCAAAAAGACCCCTTCAACAGGGACATGGGAGAGCGATATCGAAGGGAGATGCTAGCTCATGGAGGTAGTAAGGAGCCCATGCTTATGGTGGAAGGCATGCTTCAGAGCTCTCCTACCCTTGAAGAATTAGTGGACGCTCTAGTAGCTGACCTGGACACAGACTCAGTAACTTGCCGTGATGATTCCTCATGAGCAGATTGTacttttgttgttttttacctACTGTGAATTATCACGGGAAATTAGGGGCAGGGCCCCTCCCCACTTACTTCATCCTACGCTTAGCGATGTTGAATTTCAAAATTGATATTACTCTGCAGTGGCCTGATGAGTATGAGGGAATGAAAATATGAAGTGTGTATAATATTGTATATGACTTGTGATGCATCCTTGTCTCATTGTGAATTATGAACCCTTAACATCCATGTTGCCAGTGCCAACCCTATATTGTCTATTTTTTTTGTCATCTGAACAACTAGTGTTCTCTTACTTGGCTATTACTCTGTAAATCTCTAGCTACATGTTTCAGCTATTGAATGAATCACTCTTGAATACTCTTTTTTGTGAGATAGACCATCAGCAGCCTGATTAGTGAAACAAGTGAAAGAGCTGTGGGCCTGCTATTGTTTTGACAGAGAATAAGGGGACGGAGGATGTCTGAAGGGCTGCAGATAAATGACAGACTCACTAAAGCAATACGGCTCCATGCTGGCCTCTGGAAGAGCTCTGCTGTATTCTCTGGTTTTCCTTCATACTAACGAACACcattaaaataatgattgaca

Function

NR:

description
mitochondrial intermediate peptidase-like

GO: NA

KEGG:

id description
K01410 MIPEP; mitochondrial intermediate peptidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021623465.2 True 3218 mRNA 0.46 19 30739765 30755440

Neighbor

gene id symbol gene type direction distance location
LOC110537426 NA coding downstream 67640 30648676 ~ 30672125 (-)
LOC110537425 LOC106567906 coding downstream 101727 30633836 ~ 30638038 (-)
LOC110537422 LOC106567903 coding downstream 176010 30537787 ~ 30563755 (-)
LOC110537420 LOC106567901 coding downstream 218931 30494121 ~ 30520834 (-)
LOC110536844 LOC106603575 coding downstream 260094 30476900 ~ 30479671 (-)
LOC110537432 NA coding upstream 14724 30738076 ~ 30773877 (-)
LOC110537435 dscam coding upstream 139622 30895062 ~ 31031788 (-)
LOC110537436 tmprss2 coding upstream 319421 31074861 ~ 31100847 (-)
mmp30 LOC106567923 coding upstream 358217 31113657 ~ 31122131 (-)
mmp mmp coding upstream 387635 31143075 ~ 31150780 (-)
G1059331 NA non-coding downstream 31982 30707570 ~ 30707783 (-)
G1059290 NA non-coding downstream 39259 30692953 ~ 30700506 (-)
G1059288 NA non-coding downstream 39367 30691067 ~ 30700398 (-)
G1059287 NA non-coding downstream 44431 30693176 ~ 30695334 (-)
G1059318 NA non-coding downstream 67024 30672491 ~ 30672741 (-)
G1059388 igsf5 non-coding upstream 61531 30816971 ~ 30861437 (-)
G1059505 NA non-coding upstream 244717 31000157 ~ 31006587 (-)
G1059546 NA non-coding upstream 311028 31066468 ~ 31066694 (-)
G1059613 NA non-coding upstream 318052 31073492 ~ 31073754 (-)
G1060051 NA non-coding upstream 460675 31216115 ~ 31216331 (-)
LOC110537417 rnasek other downstream 287552 30447386 ~ 30452456 (-)
G1059183 NA other downstream 404509 30334827 ~ 30335256 (-)
LOC110537405 NA other downstream 786111 29951555 ~ 29960420 (-)
G1058320 NA other downstream 936149 29800853 ~ 29803616 (-)
G1059610 NA other upstream 312145 31067585 ~ 31070860 (-)
G1061331 NA other upstream 1235770 31991210 ~ 31992555 (-)
G1062051 NA other upstream 2284045 33039485 ~ 33086066 (-)
G1062603 NA other upstream 2757485 33512925 ~ 33513375 (-)
med13a med13 other upstream 2762325 33419083 ~ 33532690 (-)

Expression


Co-expression Network