Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118937817 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 31160612 ~ 31176005 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: LOW QUALITY PROTEIN: protein BTG3-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC118937817 | True | 984 | mRNA | 0.53 | 4 | 31160612 | 31176005 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mmp | mmp | coding | downstream | 9832 | 31143075 ~ 31150780 (-) |
| mmp30 | LOC106567923 | coding | downstream | 38481 | 31113657 ~ 31122131 (-) |
| LOC110537436 | tmprss2 | coding | downstream | 59765 | 31074861 ~ 31100847 (-) |
| LOC110537435 | dscam | coding | downstream | 128824 | 30895062 ~ 31031788 (-) |
| LOC110537432 | NA | coding | downstream | 386735 | 30738076 ~ 30773877 (-) |
| LOC110537438 | LOC106567925 | coding | upstream | 8860 | 31184865 ~ 31200704 (-) |
| LOC110537440 | LOC106567926 | coding | upstream | 30758 | 31206763 ~ 31215499 (-) |
| LOC110537441 | LOC106567928 | coding | upstream | 53542 | 31229547 ~ 31235038 (-) |
| LOC110537443 | LOC106603553 | coding | upstream | 128918 | 31304923 ~ 31333428 (-) |
| LOC110536848 | LOC106568063 | coding | upstream | 537243 | 31713248 ~ 31738374 (-) |
| G1059613 | NA | non-coding | downstream | 86858 | 31073492 ~ 31073754 (-) |
| G1059546 | NA | non-coding | downstream | 93918 | 31066468 ~ 31066694 (-) |
| G1059505 | NA | non-coding | downstream | 154025 | 31000157 ~ 31006587 (-) |
| G1059388 | igsf5 | non-coding | downstream | 299175 | 30816971 ~ 30861437 (-) |
| G1059352 | NA | non-coding | downstream | 415806 | 30743829 ~ 30744806 (-) |
| G1060051 | NA | non-coding | upstream | 40110 | 31216115 ~ 31216331 (-) |
| G1060052 | NA | non-coding | upstream | 40505 | 31216510 ~ 31216837 (-) |
| G1060173 | NA | non-coding | upstream | 226695 | 31402700 ~ 31403048 (-) |
| G1060181 | NA | non-coding | upstream | 237277 | 31413282 ~ 31413519 (-) |
| G1060182 | NA | non-coding | upstream | 238021 | 31414026 ~ 31414242 (-) |
| G1059610 | NA | other | downstream | 89752 | 31067585 ~ 31070860 (-) |
| LOC110537425 | LOC106567906 | other | downstream | 523890 | 30633836 ~ 30638038 (-) |
| LOC110537417 | rnasek | other | downstream | 708399 | 30447386 ~ 30452456 (-) |
| G1059183 | NA | other | downstream | 825356 | 30334827 ~ 30335256 (-) |
| G1061331 | NA | other | upstream | 815205 | 31991210 ~ 31992555 (-) |
| G1062051 | NA | other | upstream | 1863480 | 33039485 ~ 33086066 (-) |
| G1062603 | NA | other | upstream | 2336920 | 33512925 ~ 33513375 (-) |
| med13a | med13 | other | upstream | 2341760 | 33419083 ~ 33532690 (-) |
| LOC110537478 | NA | other | upstream | 2530467 | 33667535 ~ 33707659 (-) |
