LOC110537444


Basic Information

Item Value
gene id LOC110537444
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 31377867 ~ 31379355 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002475626.2
ACCACAATATCCAGAATTCATAGCGATTTCAGGACGTGGAGAAACGCCCGGTGGAGAAGTAGGGTATCCAATTGATGGGTGAAAAATCAAAATGTCTGATTTTGTAGCCAGCACTTTCAGCTAGTTCTAAACGGAACTGAAGTCACAACTGATGGGGTTGCCATGTCGTCAAACATTGAAAAGTGATGCTATTCCAGTGAATTTCCCCTTCACTTCAAAGAGGAAGGCATCCGATCAGCCGACATCAGTGCAGCAGAAAAGAAGGCAAGCTGAGGAGACTTGGAGTACATATAAAGCTTCTGCAAGAGGTCGAAGCAGTGGGTGGTGAAGAACACCGCCACCGCGCCAAAGCCTGCTAAACCAAATGCCATTACCCAACACAAGAAGAGGTTCACCAGCTGAAGAACATTCAGGACCCTGCCTGGAACATTCAGGCAACACAACGTACATATTCAGTTAGACTGATGTTGTAGTATAATATAGAATGCCCAGTATGCTCACAACTGCATTGTGGTATAGATATTTCTAGCTCTTGTACATATGTATATAATGGTGTTATATAATATTTTTGAATGTATTAGATTCAGTGAGTAAACAATTCCAGGTGCATCAGAAACCAATAAAGTGTTGACTTCAACTTCTGGAT
>TU1207384
GGAGAAACGCCCGGTGGAGAAGTAGGGTATCCAATTGATGGGTGAAAAATCAAAATGTCTGATTTTGTAGCCAGCACTTTCAGCTAGTTCTAAACGGAACTGAAGTCACAACTGATGGGGTTGCCATGTCGTCAAACATTGAAAAGTGATGCTATTCCAGTGAATTTCCCCTTCACTTCAAAGAGGAAGGCATCCGATCAGCCGACATCAGTGCAGCAGAAAAGAAGGCAAGCTGAGACTTGGAGTACATATAAAGCTTCTGCAAGAGGTCGAAGCAGTGGGTGGTGAAGAACACCGCCACCGCGCCAAAGCCTGCTAAACCAAATGCCATTACCCAACACAAGAAGAGGTTCACCAGCTGAAGAACATTCAGGACCCTGCCTGGAACATTCAGGCAACACAACGTACATATTCAGTTAGACTGATGTTGTAGTATAATATAGAATGCCCAGTATGCTCACAACTGCATTGTGGTATAGATATTTCTAGCTCTTGTACATATGTATATAATGGTGTTATATAATATTTTTGAATGTATTAGATTCAGTGAGTAAACAATTCCAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002475626.2 False 646 mRNA 0.42 2 31377867 31379355
TU1207384 True 564 lncRNA 0.43 2 31377904 31379313

Neighbor

gene id symbol gene type direction distance location
LOC110537442 LOC106567929 coding upstream 74142 31246287 ~ 31303725 (+)
LOC110537434 NA coding upstream 498750 30848508 ~ 30879117 (+)
igsf5a igsf5 coding upstream 553509 30798899 ~ 30824358 (+)
LOC110537431 wrb coding upstream 589230 30774040 ~ 30788637 (+)
LOC110536847 LOC106567912 coding upstream 638155 30738229 ~ 30739712 (+)
LOC110537445 LOC106567930 coding downstream 34608 31413963 ~ 31472999 (+)
LOC110537446 LOC106568062 coding downstream 109093 31488448 ~ 31493095 (+)
LOC110537448 LOC106567933 coding downstream 114202 31493557 ~ 31542108 (+)
LOC110537449 NA coding downstream 262439 31641794 ~ 31648451 (+)
LOC118937660 NA coding downstream 275258 31654613 ~ 31749798 (+)
G1059753 NA non-coding upstream 35697 31341933 ~ 31342170 (+)
G1059691 NA non-coding upstream 92108 31258724 ~ 31285759 (+)
G1059704 LOC106567928 non-coding upstream 144855 31232393 ~ 31233012 (+)
G1059701 NA non-coding upstream 150386 31227151 ~ 31227481 (+)
G1059700 NA non-coding upstream 151022 31226453 ~ 31226845 (+)
G1059778 NA non-coding downstream 17730 31397085 ~ 31397362 (+)
G1059799 NA non-coding downstream 18480 31397835 ~ 31398044 (+)
G1059802 NA non-coding downstream 21315 31400670 ~ 31400890 (+)
G1059811 NA non-coding downstream 30692 31410047 ~ 31410487 (+)
G1059814 NA non-coding downstream 33245 31412600 ~ 31412857 (+)
G1059685 LOC106567926 other upstream 168510 31207629 ~ 31209357 (+)
G1059091 NA other upstream 370801 31000227 ~ 31007066 (+)
G1058787 LOC106567901 other upstream 860977 30516081 ~ 30516890 (+)
G1058669 NA other upstream 1120318 30257057 ~ 30257549 (+)
G1060470 NA other downstream 431707 31811062 ~ 31811347 (+)
G1062404 NA other downstream 1980379 33359734 ~ 33366249 (+)
G1062537 NA other downstream 2128964 33508319 ~ 33508863 (+)
G1062648 NA other downstream 2278923 33658278 ~ 33661949 (+)
ubb ubb other downstream 3387669 34766968 ~ 34770882 (+)

Expression


Co-expression Network