Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110537451 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 31897610 ~ 31900587 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| C-type lectin domain family 4 member E-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021623509.2 | True | 1259 | mRNA | 0.39 | 4 | 31897610 | 31900587 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110539140 | LOC106567939 | coding | downstream | 57592 | 31837886 ~ 31840018 (-) |
| LOC110536848 | LOC106568063 | coding | downstream | 159236 | 31713248 ~ 31738374 (-) |
| LOC110537443 | LOC106603553 | coding | downstream | 564182 | 31304923 ~ 31333428 (-) |
| LOC110537441 | LOC106567928 | coding | downstream | 662572 | 31229547 ~ 31235038 (-) |
| LOC110537440 | LOC106567926 | coding | downstream | 682111 | 31206763 ~ 31215499 (-) |
| LOC118937661 | LOC106567942 | coding | upstream | 59040 | 31959627 ~ 31961527 (-) |
| LOC110537458 | LOC106567946 | coding | upstream | 237412 | 32137999 ~ 32300172 (-) |
| LOC110537459 | LOC106567948 | coding | upstream | 403610 | 32304197 ~ 32323673 (-) |
| LOC110537460 | LOC106567949 | coding | upstream | 433377 | 32333964 ~ 32344103 (-) |
| umodl1 | LOC106568047 | coding | upstream | 489947 | 32390534 ~ 32401265 (-) |
| G1061276 | NA | non-coding | downstream | 1733 | 31895515 ~ 31895877 (-) |
| G1061275 | LOC106603546 | non-coding | downstream | 11842 | 31884224 ~ 31885768 (-) |
| G1061273 | NA | non-coding | downstream | 14855 | 31882248 ~ 31882755 (-) |
| G1061270 | LOC106567935 | non-coding | downstream | 17460 | 31879227 ~ 31880150 (-) |
| G1061269 | LOC106567935 | non-coding | downstream | 18762 | 31878624 ~ 31878848 (-) |
| G1061278 | NA | non-coding | upstream | 1091 | 31901678 ~ 31902178 (-) |
| G1061259 | NA | non-coding | upstream | 13579 | 31914166 ~ 31916223 (-) |
| G1061258 | stt3a | non-coding | upstream | 29971 | 31930558 ~ 31932634 (-) |
| G1061286 | NA | non-coding | upstream | 36972 | 31937559 ~ 31937794 (-) |
| G1061288 | NA | non-coding | upstream | 39540 | 31940127 ~ 31940547 (-) |
| G1059610 | NA | other | downstream | 826750 | 31067585 ~ 31070860 (-) |
| LOC110537432 | NA | other | downstream | 1123803 | 30738076 ~ 30773877 (-) |
| LOC110537425 | LOC106567906 | other | downstream | 1260888 | 30633836 ~ 30638038 (-) |
| LOC110537417 | rnasek | other | downstream | 1445397 | 30447386 ~ 30452456 (-) |
| G1059183 | NA | other | downstream | 1562354 | 30334827 ~ 30335256 (-) |
| G1061331 | NA | other | upstream | 90623 | 31991210 ~ 31992555 (-) |
| G1062051 | NA | other | upstream | 1138898 | 33039485 ~ 33086066 (-) |
| G1062603 | NA | other | upstream | 1612338 | 33512925 ~ 33513375 (-) |
| med13a | med13 | other | upstream | 1617178 | 33419083 ~ 33532690 (-) |
| LOC110537478 | NA | other | upstream | 1805885 | 33667535 ~ 33707659 (-) |
