LOC110537459 (LOC106567948)


Basic Information

Item Value
gene id LOC110537459
gene name LOC106567948
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 32304197 ~ 32323673 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021623520.2
GCCAAAATCGCATCCACTTAGGTTATTTTCCAGGAGCGCATCGGTTTGTAAATAAAAATACACCTCCCACCCCCTCCCATACTGACTGTGACTGGCTCCTCCCATACCGGTTAAATGCGCGCTCGGCGCTTCAATTCAGTACAGTGGAAAGCAGTCATGATAGAGGAGCTGTAGAGTTTACAAACTTTAAAGCAGCAAGTATTTCCAAGTCTTGTAATCTGTTTATTCCCGGAGCCACAGTTATGAAGACCATACTTGCTGCCTACTCCGGTGCTCTAAAAGGCACAGGTTATAGCATCCTCTCGTCCCTGCAGGACCTGCCCTCCCCTCCATGGCCTGCCCTTCGATCCAAGATGGAGAAACATCTTCAGGTCATCGCAGTTCTTCAGTGGGTCATCTCCTTCCTCGCCATGGGCATCAGCTGCACTGTGCTGTTAATCTACATGTTTTGCACAGACCTCTGGGTGATCGCTGCCATGTACACTACCTGGCTAATCTTCGACTGGAACACCCCCAAACAAGGTGGCAGGAGGTCCTCTTGGGTGAGGAACTGGACTGTGTGGACTTACTTCAGAGATTACTTTCCCATCAGGCTCATCAAGACACATAACTTGCCGCCCAGCCGAAACTACATCTTTGGGTACCACCCCCACGGGATCTTCTCTTTCGGAGCCTTCTGTAACTTCGGGACTGAGGCCACTGGATTCTCCAAGAAGTTCCCGGGCATCAAGCCTTCTCTTGCCACCCTGGCTGGAAACTTCCGGATGCCAGTCCTTAGAGACTATCTCATGTCTGGGGGTATCTGCCCAGTGAACCGTAACTCCATCGACTACCTCCTCTCTCAGAATGGAACTGGCAACGCAGTGGTCATCGTTGTCGGGGGAGCAGCAGAATCTCTGGACTGTGCTCCAGGCATGAATTCTGTCACCCTGAATAACCGCAAGGGATTTGTGAGGCTGGCCCTCCAGCAAGGGTCTGACCTGGTGCCGGTCTACTCCTTTGGGGAGAACAATGTGTACAAGCAGGTGATCTTTGAGGAGGGAACCTGGTGTCGGCTAGCTCAGAAGCGGCTGCAGAAGATTCTGGGGTTTGCTCCCTGTCTGTTCCATGGCTGTGGCCTCTTCTCTGACTCCTGGGGAATGGTGCCTTACAATAAACCCATCACCACCATCGTGGGTGAACCGATCACAGTACCAAAGGTTGAGGAGCCTACTCGGGATATGGTGGAACTGTACCATGCCATGTACATCAAGTCCCTCAGGAGCCTCTTTGACAAGTATAAGACCCGCTTCGGATTGAAAGAGAGTGACATCCTGCACATCCAATGAGAAAAGAGTGAGCGGGACCCCCTCGGAACCTCAGAACTGTGGCAGCTGTTTGTTCAGCCTCGACACCCCATTCACGTGCATGGATCTGATTGATTGTCTCTGGAATTCAATCGATATACATAAAGTTGTGGGTGTGTAATAAACCCACCCGCGCTCTCATCCTCGTCCAGTATACAAGGCTCACGTCCCTACTCCACTCAGGGTGAAAATGGCAGGTTTTAATGTTTTAGGTTGCTTTACTATTCCGCCTGACCTAGTCCTTGCCAATAGCAAAGTTGACTATCTTAAATGTCTCCGAATGGAGTCTCTTCAGCGTATGCCACATTTCTAGATATGTTCCATGACAGAAGAGATGAGGGAGTATAGTTTGATAAGATACGATCACTTGCTTTCATGTGCAGTGGAACTCCCACTAGGTGGCACTAGAAggctatatatacatacacacacacacaagcaccatGTTTGTTTCCCCCATGTATCCATGTAGTTGTCCCATATATTAGGCCCTAAAAAAAGTTCAATATCAGATGTTTTGAggcctttatttattttttgctaaaTGCACAAACAATGCAATTGTAATGGTATGGCCTCACTCAGAAGTTAATATAGTGTGGTAATTGAGCCAAAGAACTGATGGGTGTCCCCTCCCAGCACACGCATACTTAATTGAAACTGGAAGGAAGTAATTCTAATGGATTTAGATTGTGTACATGTGTTTATAGGATGCCACTAACTATTGTATTATGTAAATAAGAAAAAACCTGTCCTCCCTTGTCCAATggaaaaaatgtttttcttcCATAAATTTATATATTGATGCACTTTTTGTAATTTGTTACAACCCTCTGAGGTATTGCACTAAAATGTGCCTTAGGAATTTTTCAATGTCACATTTTTATTGACTGGGCTGCAGAGTGTTTAGTGCCTTGATGCCCTATGTACTGTAGTTGTTGACGATTTTGATGTAAAAACAATTCTTCCTCCACACAGAGGGCAGATCAGTGATGAATGTCATGAAAATACACTTATTGTGGGGTTCTACTCAATTGAGTAAAATGGTAAATGTACAGTATAAGGGTTTTTCTATCACACATTTGGATTAGAGTTAAAAGTCAAACTCCCATGGTAATTTCCAAGAAGTGTTAGCGAAATTACTGAGACTTGATATGCCATCATCCTGCCAATTATCTTAGGTGCAGAACTGTTTGTATATTATGCAAGATGAAAAGACTACAATTAATTTGCAATGTGGTGAAATGTTGAGGTTGGTGATGAGTGCTAAATAGAAGTGTCATTTGAAATGCAAATTCTTCTAGCTTCAACATTAACTTCTTGTAAAGGGCAATAAACATCTCTCTCTTAACTCATGTGCAATAAACAGCAGCCAAGGCATTGAAGTTGTGAATGAATAGCTTGAGCAAAATCTGTCTACTTAAATGAAACTTTTTGTTTTTAGAATAAAACTTAACATGCCTTCGTAAA

Function

NR:

description
diacylglycerol O-acyltransferase 2-like

GO: NA

KEGG:

id description
K11160 DGAT2; diacylglycerol O-acyltransferase 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021623520.2 True 2816 mRNA 0.45 8 32304197 32323673
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110537458 LOC106567946 coding downstream 4025 32137999 ~ 32300172 (-)
LOC118937661 LOC106567942 coding downstream 342670 31959627 ~ 31961527 (-)
LOC110537451 NA coding downstream 403610 31897610 ~ 31900587 (-)
LOC110539140 LOC106567939 coding downstream 464179 31837886 ~ 31840018 (-)
LOC110536848 LOC106568063 coding downstream 565823 31713248 ~ 31738374 (-)
LOC110537460 LOC106567949 coding upstream 10291 32333964 ~ 32344103 (-)
umodl1 LOC106568047 coding upstream 66861 32390534 ~ 32401265 (-)
LOC110537466 LOC106567955 coding upstream 90890 32414563 ~ 32416279 (-)
LOC118937881 LOC106568064 coding upstream 148985 32472658 ~ 32475120 (-)
LOC110537471 LOC106567958 coding upstream 333064 32656737 ~ 33146644 (-)
G1061483 NA non-coding downstream 33017 32187869 ~ 32271180 (-)
G1061430 NA non-coding downstream 179047 32122866 ~ 32125150 (-)
G1061325 NA non-coding downstream 325048 31978924 ~ 31979149 (-)
G1061324 NA non-coding downstream 325494 31978329 ~ 31978703 (-)
G1061319 NA non-coding downstream 328662 31975310 ~ 31975535 (-)
G1061574 LOC106567950 non-coding upstream 53541 32377214 ~ 32380107 (-)
G1061666 NA non-coding upstream 161045 32484718 ~ 32485654 (-)
G1061676 NA non-coding upstream 183262 32506935 ~ 32507183 (-)
G1061669 NA non-coding upstream 209496 32533169 ~ 32556542 (-)
G1061708 NA non-coding upstream 226868 32550541 ~ 32579617 (-)
G1061331 NA other downstream 311642 31991210 ~ 31992555 (-)
G1059610 NA other downstream 1233337 31067585 ~ 31070860 (-)
LOC110537432 NA other downstream 1530390 30738076 ~ 30773877 (-)
LOC110537425 LOC106567906 other downstream 1667475 30633836 ~ 30638038 (-)
LOC110537417 rnasek other downstream 1851984 30447386 ~ 30452456 (-)
G1062051 NA other upstream 715812 33039485 ~ 33086066 (-)
G1062603 NA other upstream 1189252 33512925 ~ 33513375 (-)
med13a med13 other upstream 1194092 33419083 ~ 33532690 (-)
LOC110537478 NA other upstream 1382799 33667535 ~ 33707659 (-)
cenpv LOC107676655 other upstream 2433581 34755024 ~ 34759345 (-)

Expression

LOC110537459(LOC106567948) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1000.
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LOC110537459(LOC106567948) Expression in each Bioproject

Bar chart with 20 bars.
LOC110537459(LOC106567948) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 2000.
End of interactive chart.

Co-expression Network