umodl1 (LOC106568047)


Basic Information

Item Value
gene id umodl1
gene name LOC106568047
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 32390534 ~ 32401265 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036939505.1
ATGAGTTGGATGTCCTTTCTCTGTCTGGCCACTGCCTTTCTGGACCTCTGTAGGGGACACAACACCTTGTTTGAAGGATATGACCTGTCTATGTCCAGCTACCACCTGTGTACTCGACATGAGAGCACGGTGGTGAGTAAAGTGTTGTCCTATAAGATCTCTTACACGGTCAGGAGGTCATGTGGCGACTGGCTACCCTGGAAGATGTGTGAGGTCACAGTTTACAAAAAGGCATATCGGACTGAGTACATGAATGTCATCAAAGACGTTTTGAGGTGTTGTGATGGCTATGAACAAGTGGGCAGCTACTGTGCTTTAACTATGAACAGAAGTGGAGAGTTCACTGCTAAGCCAGGGTCCTGTCCTGAGGGTGTTGTGGAGGCACCCAGGAGTGGAGGGTGTGAATGGGACTTAGACTGCCCAGGCTGGAAAAAGTGCTGCCAGAGAGAAGGCCTTTCTCTCTgtactgaccctcagtctgcagGCATTAGAAGCTGGTGCTTTCACGTCACTGTGACAGCGAAGATAGATTACCAGCGGCTGATATCCATGGACGGGGGAATCCTGAACCACACAAGGCTGCTGCACTCTGTGGTGACTGGAGCGCTGGACTCTTATGACGTCTCTGTATACTATATCAGATCCTGGCCTATATGGCCATTTAgaacctcctcctctctgctgaTTAGTTCCCCTGAAATTCTGTCCCTGTCCAACACGACCACAAAGCTGCACCTTCTTCTCATACACATTGAAGAAGTCACCTCGGTGTCAGTTGAAGACATGAATGAGTGTAGCCATGCCGCTCTCAGCAGCTGCTCACGTCAGGCAGACTGTACCAACACAGAGGGCTCCTACAGCTGCACCTGCCATCCAGGGTTAATTGATCTCAACCCCAACAACAAAGGGGTACACTGCCAAGAAGTTGAGATTTATTACTGTCTCCCTTCTCCCCCAGACCCCGCCCCCATCACCAACCTGCAGGCTTCCAGCGTCACTGGCTCCTCCTTCTGCGTGTCCTGGATGACTGGCCAATCCCAGAGTGGGTTTAGCTTTCTGGTGGTGCTGATggaggggtcaaaggtcaggggACGCTGGGAGACGGGGTTGTCAGTCTGGGAGGTGACATTGTTGAAGCCTGGGGTTCTCCACAACGTTACTGTCATTTCCTGTCCCTATGGGAGTCAGGGGGCCAGCCTGCTGGTTAAGACTGCTGCACAGACACTTGGAGCAACAGCTCACCTGACCAATGTGCAGTTCACTGATGCCCTGCTGGACCCTGCTAGCCAGATGTATCAGAATCTTAGTCGTAGTATTATGGAAGAGAtcctccagtctctccctccTGATATTCTGGCCCTGGTAAACTCAGGAGATGTGAGGGTTCAGATCACAGGCCTGGCCCCCGGCAGTGTAGTAGTGAACTTCACCATCATCTTCACACCCAGTCAGTCCCTGGACATCCTGAaagtgtcctctgttctgatgcaGGCCCTACAGAACAGCTCCAGATACACTGTTGACAGCAACAACACCAGCATAGATGATGTTGATGAGTGCAGTACAGGGGACATGGACTGCTCCCCATGGGCCCAGTGCACTAACACCTGGGGCTCCTACAGTTGTCTCTGTCTGGATGGATTCACGGACTCTAACCCCTCTAGGCCGGGACGGGTCTGTTCAGCACCTATGTCCGCAACCACACCTATGTTCGCAACCACAACAAACACTCCGGTTACAACCAGCAATACAGTGTCAACCACTACCACCTACAATACAACCTCAATTACATCCAACAATACAGATGCAGCTACAATGAACGCACCCGTTACAACCACTGTCAACAATACAGTGAGAATCAACAACACAGTTTCAACCAAAACTCCAGTCACAATCACAACCATGGCGCCAGTTACAACCTCAACCATCACTGAAGTTCCTACAAAAATGACCAGCGGTCTCATCAATACCAGTCTGCAGCCTGAGACTCCTACATCTCTGGCTCCTCTGGTCTCTTATACAGAAGCCATCTCAGTGGAGTGCAGGGCCAGTGCCATCACGGTGACAGTGGCCAGGGACTTCCTGTGGTCGGGGCACATTGGGGACTCTTCCCTGTTCCTAGGGACACAGGAGTGTGGCGTGAACGGAGGGAACAGTAGCCACGTCCAACTGACGGTGGCGTGGGACGAGTGTAACACACAGCTCTTATATGTGAGTCACACTCACTACACTGCTCAGGTGATTCTGTACAACTCTATGAGCTCTCAGCTCTTGCCTGATGACACTACAAGGGTTCCCACAGTATGGCTGAAGGTCCCCATCATGTGTACCTTCAGGAGGAGCATCATCATCTCCTCTGGTTACAGCACCGCAGGGTATGATATGATCAATGATGCTGTCATGGGCTCAGGGACGTTCTACGTGACATTTCAGCTCCTGAATGGAATGTCACCCCTACCCCAGAACTACAGCCTGTCTCCTGAGGAGGACGTTGTGGTCGAGGTCAGCGTTGACTCCACGGTTGCCCAGATCAAAGTGGTCATCAACAAGTGCTGGGCCACCCAGAGCAGCAACCCCTTAGAACCAACAACCTATGTTTTTCTGGAAAACAGcTGTCCCCTCCCAAACACATACACCACAGTCGTGGAGAACGGCAACTCCAGCAAGTCTCGCCTGTCTCTTCGCATCTTCTCCTACATCAACCTGAATGTCATCTACCTGCACTGCCAGATTCAGATCTGTATCGAGACTGGCTCAGCCACCTGCCAGCCTGTGAGCATCTGTCCAGATGTATTCATACTcatgatGTCGCAAGGGTCTGTACACAacttctggaagctgaaaatgtcccagttcttccatggcctgcatacccaCCAGACATGTTGCTCATTGAGcaggtttgggatgctctggatctacatgttccagttcccgccaatatggATGCCCGTCGAAGAGAGATCTGATACTCTTCGTCTGGTGGGCTACAGTTTACTGGGAATAGGACTATTCCTCCTCTTTATCGGGAGTCTCTCTTCCTTGTTCTTCAGCCACAGGAAGCGAATTGGAACCTACAGCTTCAGCCTCAAACCCAAACAAGATAACTATACCTATCATGTTTTCAATACTTAGTGCTGGAACACTTTTAGGCTAGTTTTAGTGAACTCAAAGACATAGTAAAGTTGGTTGCCTAGTAGTCAGAAATGAAGAGGTCAATGCAGAT

Function

NR:

description
PREDICTED: uromodulin-like 1

GO: NA

KEGG:

id description
K24499 UMODL1; uromodulin-like 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036939505.1 True 3226 mRNA 0.51 16 32390534 32401265

Neighbor

gene id symbol gene type direction distance location
LOC110537460 LOC106567949 coding downstream 46431 32333964 ~ 32344103 (-)
LOC110537459 LOC106567948 coding downstream 66861 32304197 ~ 32323673 (-)
LOC110537458 LOC106567946 coding downstream 90362 32137999 ~ 32300172 (-)
LOC118937661 LOC106567942 coding downstream 429007 31959627 ~ 31961527 (-)
LOC110537451 NA coding downstream 489947 31897610 ~ 31900587 (-)
LOC110537466 LOC106567955 coding upstream 13298 32414563 ~ 32416279 (-)
LOC118937881 LOC106568064 coding upstream 71393 32472658 ~ 32475120 (-)
LOC110537471 LOC106567958 coding upstream 255472 32656737 ~ 33146644 (-)
LOC118937663 NA coding upstream 439121 32840386 ~ 32842865 (-)
LOC118937664 NA coding upstream 957182 33358447 ~ 33392252 (-)
G1061574 LOC106567950 non-coding downstream 10427 32377214 ~ 32380107 (-)
G1061483 NA non-coding downstream 119354 32187869 ~ 32271180 (-)
G1061430 NA non-coding downstream 265384 32122866 ~ 32125150 (-)
G1061325 NA non-coding downstream 411385 31978924 ~ 31979149 (-)
G1061324 NA non-coding downstream 411831 31978329 ~ 31978703 (-)
G1061666 NA non-coding upstream 83453 32484718 ~ 32485654 (-)
G1061676 NA non-coding upstream 105670 32506935 ~ 32507183 (-)
G1061669 NA non-coding upstream 131904 32533169 ~ 32556542 (-)
G1061708 NA non-coding upstream 149276 32550541 ~ 32579617 (-)
G1061735 NA non-coding upstream 174565 32575830 ~ 32665872 (-)
G1061331 NA other downstream 397979 31991210 ~ 31992555 (-)
G1059610 NA other downstream 1319674 31067585 ~ 31070860 (-)
LOC110537432 NA other downstream 1616727 30738076 ~ 30773877 (-)
LOC110537425 LOC106567906 other downstream 1753812 30633836 ~ 30638038 (-)
LOC110537417 rnasek other downstream 1938321 30447386 ~ 30452456 (-)
G1062051 NA other upstream 638220 33039485 ~ 33086066 (-)
G1062603 NA other upstream 1111660 33512925 ~ 33513375 (-)
med13a med13 other upstream 1116500 33419083 ~ 33532690 (-)
LOC110537478 NA other upstream 1305207 33667535 ~ 33707659 (-)
cenpv LOC107676655 other upstream 2355989 34755024 ~ 34759345 (-)

Expression


Co-expression Network